Hb_000000_140

Information

Type -
Description -
Location Contig0: 239683-240694
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0003677
description hypothetical protein JCGZ_04374

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000000_140 0.0 - - -
2 Hb_001377_500 0.1541047722 - - DOF AFFECTING GERMINATION 2 family protein [Populus trichocarpa]
3 Hb_012702_010 0.168966865 - - PREDICTED: TMV resistance protein N-like isoform X4 [Vitis vinifera]
4 Hb_002248_090 0.1800344381 - - metallothionein 3-like protein [Hevea brasiliensis]
5 Hb_048653_020 0.1878323722 - - ankyrin repeat-containing protein, putative [Ricinus communis]
6 Hb_001373_080 0.1901884302 desease resistance Gene Name: NB-ARC leucine-rich repeat-containing protein, putative [Ricinus communis]
7 Hb_001608_030 0.1945165649 - - Protein NSP-INTERACTING KINASE 1 [Glycine soja]
8 Hb_010080_020 0.1957797337 - - PREDICTED: uncharacterized protein LOC105635249 [Jatropha curcas]
9 Hb_002660_100 0.1974936021 - - plasma membrane intrinsic protein [Hevea brasiliensis]
10 Hb_000608_020 0.1980769899 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
11 Hb_005000_200 0.1981173298 - - PREDICTED: uncharacterized protein LOC105637887 [Jatropha curcas]
12 Hb_000844_010 0.2006216507 - - PREDICTED: lysine histidine transporter-like 8 [Jatropha curcas]
13 Hb_002272_140 0.2033729724 - - PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Jatropha curcas]
14 Hb_001073_060 0.2041555168 - - phosphate transporter 1 [Hevea brasiliensis]
15 Hb_022206_030 0.2065833784 - - Auxin-induced in root cultures protein 12 precursor, putative [Ricinus communis]
16 Hb_000676_030 0.2067496167 - - PREDICTED: probable mitochondrial chaperone BCS1-B [Jatropha curcas]
17 Hb_017417_030 0.2077557911 transcription factor TF Family: bZIP Ocs element-binding factor, putative [Ricinus communis]
18 Hb_131591_010 0.2081471621 - - PREDICTED: cytochrome P450 83B1-like [Jatropha curcas]
19 Hb_011928_030 0.209026993 - - PREDICTED: probable calcium-binding protein CML23 [Jatropha curcas]
20 Hb_002621_030 0.210658604 - - hypothetical protein CISIN_1g006155mg [Citrus sinensis]

Gene co-expression network

sample Hb_000000_140 Hb_000000_140 Hb_001377_500 Hb_001377_500 Hb_000000_140--Hb_001377_500 Hb_012702_010 Hb_012702_010 Hb_000000_140--Hb_012702_010 Hb_002248_090 Hb_002248_090 Hb_000000_140--Hb_002248_090 Hb_048653_020 Hb_048653_020 Hb_000000_140--Hb_048653_020 Hb_001373_080 Hb_001373_080 Hb_000000_140--Hb_001373_080 Hb_001608_030 Hb_001608_030 Hb_000000_140--Hb_001608_030 Hb_001195_500 Hb_001195_500 Hb_001377_500--Hb_001195_500 Hb_002035_030 Hb_002035_030 Hb_001377_500--Hb_002035_030 Hb_000608_020 Hb_000608_020 Hb_001377_500--Hb_000608_020 Hb_002609_150 Hb_002609_150 Hb_001377_500--Hb_002609_150 Hb_002272_140 Hb_002272_140 Hb_001377_500--Hb_002272_140 Hb_019961_010 Hb_019961_010 Hb_012702_010--Hb_019961_010 Hb_012702_010--Hb_002272_140 Hb_138628_010 Hb_138628_010 Hb_012702_010--Hb_138628_010 Hb_000172_300 Hb_000172_300 Hb_012702_010--Hb_000172_300 Hb_004531_010 Hb_004531_010 Hb_012702_010--Hb_004531_010 Hb_011054_030 Hb_011054_030 Hb_012702_010--Hb_011054_030 Hb_002239_030 Hb_002239_030 Hb_002248_090--Hb_002239_030 Hb_000101_140 Hb_000101_140 Hb_002248_090--Hb_000101_140 Hb_000521_210 Hb_000521_210 Hb_002248_090--Hb_000521_210 Hb_011928_030 Hb_011928_030 Hb_002248_090--Hb_011928_030 Hb_000431_030 Hb_000431_030 Hb_002248_090--Hb_000431_030 Hb_001073_060 Hb_001073_060 Hb_002248_090--Hb_001073_060 Hb_002918_150 Hb_002918_150 Hb_048653_020--Hb_002918_150 Hb_138575_010 Hb_138575_010 Hb_048653_020--Hb_138575_010 Hb_013057_030 Hb_013057_030 Hb_048653_020--Hb_013057_030 Hb_002217_440 Hb_002217_440 Hb_048653_020--Hb_002217_440 Hb_003086_050 Hb_003086_050 Hb_048653_020--Hb_003086_050 Hb_048653_020--Hb_002272_140 Hb_008554_010 Hb_008554_010 Hb_001373_080--Hb_008554_010 Hb_131591_010 Hb_131591_010 Hb_001373_080--Hb_131591_010 Hb_000431_180 Hb_000431_180 Hb_001373_080--Hb_000431_180 Hb_001691_190 Hb_001691_190 Hb_001373_080--Hb_001691_190 Hb_002621_030 Hb_002621_030 Hb_001373_080--Hb_002621_030 Hb_001373_080--Hb_002248_090 Hb_007137_030 Hb_007137_030 Hb_001608_030--Hb_007137_030 Hb_093177_010 Hb_093177_010 Hb_001608_030--Hb_093177_010 Hb_158696_010 Hb_158696_010 Hb_001608_030--Hb_158696_010 Hb_010080_020 Hb_010080_020 Hb_001608_030--Hb_010080_020 Hb_000007_160 Hb_000007_160 Hb_001608_030--Hb_000007_160 Hb_000984_100 Hb_000984_100 Hb_001608_030--Hb_000984_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0464106 3.33066 0.316453 0.914641 0.142886 0.0819996
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0849588 0 0.118682 0.952569 0

CAGE analysis