Hb_000000_370

Information

Type transcription factor
Description TF Family: BES1
Location Contig0: 639924-642050
Sequence    

Annotation

kegg
ID rcu:RCOM_1593760
description BRASSINAZOLE-RESISTANT 1 protein, putative
nr
ID XP_012071788.1
description PREDICTED: protein BRASSINAZOLE-RESISTANT 1 [Jatropha curcas]
swissprot
ID Q8S307
description Protein BRASSINAZOLE-RESISTANT 1 OS=Arabidopsis thaliana GN=BZR1 PE=1 SV=1
trembl
ID A0A067L2Y7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04394 PE=4 SV=1
Gene Ontology
ID GO:0005634
description protein brassinazole-resistant 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_00092: 639991-642034
cDNA
(Sanger)
(ID:Location)		 024_G16.ab1: 640320-641677

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000000_370 0.0 transcription factor TF Family: BES1 PREDICTED: protein BRASSINAZOLE-RESISTANT 1 [Jatropha curcas]
2 Hb_004837_040 0.0605920138 - - PREDICTED: nucleolar GTP-binding protein 1-like [Prunus mume]
3 Hb_004785_060 0.0706068706 - - PREDICTED: SKP1-interacting partner 15 [Jatropha curcas]
4 Hb_000859_060 0.0715601905 - - PREDICTED: uncharacterized protein LOC105641312 [Jatropha curcas]
5 Hb_000085_100 0.071707415 - - PREDICTED: protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 [Jatropha curcas]
6 Hb_000062_250 0.0766970024 - - PREDICTED: F-box protein SKIP14 [Jatropha curcas]
7 Hb_012807_050 0.0847859469 desease resistance Gene Name: CDC48_N PREDICTED: cell division cycle protein 48 homolog [Jatropha curcas]
8 Hb_004684_010 0.0859929736 - - PREDICTED: triacylglycerol lipase SDP1 [Jatropha curcas]
9 Hb_001584_150 0.0877120139 - - PREDICTED: putative pentatricopeptide repeat-containing protein At5g40405 [Jatropha curcas]
10 Hb_015807_070 0.0885255092 - - PREDICTED: autophagy-related protein 18f [Jatropha curcas]
11 Hb_000953_010 0.0914452362 - - hypothetical protein CISIN_1g0425012mg, partial [Citrus sinensis]
12 Hb_175338_030 0.0922027674 - - PREDICTED: uncharacterized protein LOC105648015 [Jatropha curcas]
13 Hb_000629_010 0.0925277949 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 32 isoform X1 [Jatropha curcas]
14 Hb_001021_170 0.0939139392 - - PREDICTED: uncharacterized protein LOC105642474 [Jatropha curcas]
15 Hb_002813_050 0.0940241208 desease resistance Gene Name: TIR_2 PREDICTED: uncharacterized protein LOC105635699 [Jatropha curcas]
16 Hb_001956_200 0.0946182824 - - pumilio/Puf RNA-binding domain-containing family protein [Populus trichocarpa]
17 Hb_007757_110 0.0948576956 - - PREDICTED: E3 ubiquitin-protein ligase UPL5 [Jatropha curcas]
18 Hb_004355_020 0.0950710706 - - PREDICTED: lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial [Jatropha curcas]
19 Hb_093084_060 0.0959454426 - - PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g64310 [Jatropha curcas]
20 Hb_008500_010 0.0960095315 - - PREDICTED: pentatricopeptide repeat-containing protein At2g17210 [Jatropha curcas]

Gene co-expression network

sample Hb_000000_370 Hb_000000_370 Hb_004837_040 Hb_004837_040 Hb_000000_370--Hb_004837_040 Hb_004785_060 Hb_004785_060 Hb_000000_370--Hb_004785_060 Hb_000859_060 Hb_000859_060 Hb_000000_370--Hb_000859_060 Hb_000085_100 Hb_000085_100 Hb_000000_370--Hb_000085_100 Hb_000062_250 Hb_000062_250 Hb_000000_370--Hb_000062_250 Hb_012807_050 Hb_012807_050 Hb_000000_370--Hb_012807_050 Hb_000062_240 Hb_000062_240 Hb_004837_040--Hb_000062_240 Hb_002496_030 Hb_002496_030 Hb_004837_040--Hb_002496_030 Hb_000203_160 Hb_000203_160 Hb_004837_040--Hb_000203_160 Hb_000629_010 Hb_000629_010 Hb_004837_040--Hb_000629_010 Hb_175338_030 Hb_175338_030 Hb_004837_040--Hb_175338_030 Hb_004785_060--Hb_000859_060 Hb_004785_060--Hb_012807_050 Hb_001021_170 Hb_001021_170 Hb_004785_060--Hb_001021_170 Hb_004355_020 Hb_004355_020 Hb_004785_060--Hb_004355_020 Hb_000181_070 Hb_000181_070 Hb_004785_060--Hb_000181_070 Hb_000859_060--Hb_000085_100 Hb_009767_100 Hb_009767_100 Hb_000859_060--Hb_009767_100 Hb_001178_140 Hb_001178_140 Hb_000859_060--Hb_001178_140 Hb_000859_060--Hb_004355_020 Hb_000085_100--Hb_001178_140 Hb_004204_170 Hb_004204_170 Hb_000085_100--Hb_004204_170 Hb_126643_020 Hb_126643_020 Hb_000085_100--Hb_126643_020 Hb_000085_100--Hb_000629_010 Hb_000077_230 Hb_000077_230 Hb_000062_250--Hb_000077_230 Hb_001584_150 Hb_001584_150 Hb_000062_250--Hb_001584_150 Hb_015807_070 Hb_015807_070 Hb_000062_250--Hb_015807_070 Hb_007757_110 Hb_007757_110 Hb_000062_250--Hb_007757_110 Hb_000077_070 Hb_000077_070 Hb_000062_250--Hb_000077_070 Hb_000229_020 Hb_000229_020 Hb_012807_050--Hb_000229_020 Hb_010172_090 Hb_010172_090 Hb_012807_050--Hb_010172_090 Hb_076693_020 Hb_076693_020 Hb_012807_050--Hb_076693_020 Hb_004767_050 Hb_004767_050 Hb_012807_050--Hb_004767_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
108.344 112.317 35.1536 37.5872 78.5079 107.324
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
84.1483 60.0229 137.652 78.1516 33.0483

CAGE analysis