Hb_000000_470

Information

Type -
Description -
Location Contig0: 696895-702797
Sequence    

Annotation

kegg
ID cit:102624675
description lysophospholipid acyltransferase LPEAT1-like
nr
ID XP_012071795.1
description PREDICTED: lysophospholipid acyltransferase LPEAT1 isoform X4 [Jatropha curcas]
swissprot
ID Q8L7R3
description Lysophospholipid acyltransferase LPEAT1 OS=Arabidopsis thaliana GN=LPEAT1 PE=1 SV=1
trembl
ID A0A067KU10
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04398 PE=4 SV=1
Gene Ontology
ID GO:0016746
description lysophospholipid acyltransferase lpeat1 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_00097: 699064-699183
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000000_470 0.0 - - PREDICTED: lysophospholipid acyltransferase LPEAT1 isoform X4 [Jatropha curcas]
2 Hb_007317_160 0.1158690735 - - PREDICTED: uncharacterized protein At2g27730, mitochondrial [Jatropha curcas]
3 Hb_005527_040 0.1159128281 - - PREDICTED: methionine adenosyltransferase 2 subunit beta [Jatropha curcas]
4 Hb_006452_040 0.1205313578 - - PREDICTED: signal recognition particle 9 kDa protein [Jatropha curcas]
5 Hb_027073_050 0.123062391 - - PREDICTED: uncharacterized protein LOC105635813 isoform X2 [Jatropha curcas]
6 Hb_000069_550 0.1247920335 - - PREDICTED: uncharacterized protein LOC104596457 isoform X1 [Nelumbo nucifera]
7 Hb_006569_100 0.1250534446 - - hypothetical protein POPTR_0005s26990g [Populus trichocarpa]
8 Hb_000272_070 0.1270529871 - - snare protein YKt [Hevea brasiliensis]
9 Hb_005463_140 0.1312322521 - - PREDICTED: histone deacetylase complex subunit SAP18 [Jatropha curcas]
10 Hb_005045_070 0.1317585963 - - PREDICTED: deSI-like protein At4g17486 [Jatropha curcas]
11 Hb_000817_030 0.1323549842 - - mak, putative [Ricinus communis]
12 Hb_002631_020 0.1332386557 - - PREDICTED: protein FAM32A-like [Jatropha curcas]
13 Hb_000322_140 0.1341918605 - - hypothetical protein RCOM_1047200 [Ricinus communis]
14 Hb_000366_110 0.1353513718 - - PREDICTED: signal peptidase complex catalytic subunit SEC11A-like [Jatropha curcas]
15 Hb_002324_010 0.137615602 - - PREDICTED: proteasome subunit alpha type-7 [Jatropha curcas]
16 Hb_001008_090 0.1392584753 - - cytochrome C oxidase, putative [Ricinus communis]
17 Hb_000122_020 0.1408276057 - - PREDICTED: alpha-soluble NSF attachment protein 2 [Jatropha curcas]
18 Hb_001076_020 0.1443138558 - - PREDICTED: cytochrome b-c1 complex subunit 8 [Eucalyptus grandis]
19 Hb_001454_120 0.1443869905 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000042_200 0.1448698305 - - PREDICTED: uncharacterized protein LOC100252136 isoform X1 [Vitis vinifera]

Gene co-expression network

sample Hb_000000_470 Hb_000000_470 Hb_007317_160 Hb_007317_160 Hb_000000_470--Hb_007317_160 Hb_005527_040 Hb_005527_040 Hb_000000_470--Hb_005527_040 Hb_006452_040 Hb_006452_040 Hb_000000_470--Hb_006452_040 Hb_027073_050 Hb_027073_050 Hb_000000_470--Hb_027073_050 Hb_000069_550 Hb_000069_550 Hb_000000_470--Hb_000069_550 Hb_006569_100 Hb_006569_100 Hb_000000_470--Hb_006569_100 Hb_007317_160--Hb_006452_040 Hb_001155_040 Hb_001155_040 Hb_007317_160--Hb_001155_040 Hb_005463_140 Hb_005463_140 Hb_007317_160--Hb_005463_140 Hb_012539_020 Hb_012539_020 Hb_007317_160--Hb_012539_020 Hb_000012_100 Hb_000012_100 Hb_007317_160--Hb_000012_100 Hb_005663_120 Hb_005663_120 Hb_007317_160--Hb_005663_120 Hb_001519_030 Hb_001519_030 Hb_005527_040--Hb_001519_030 Hb_005527_040--Hb_006569_100 Hb_001005_080 Hb_001005_080 Hb_005527_040--Hb_001005_080 Hb_004449_200 Hb_004449_200 Hb_005527_040--Hb_004449_200 Hb_005527_040--Hb_005663_120 Hb_000122_020 Hb_000122_020 Hb_005527_040--Hb_000122_020 Hb_003018_050 Hb_003018_050 Hb_006452_040--Hb_003018_050 Hb_002631_020 Hb_002631_020 Hb_006452_040--Hb_002631_020 Hb_006452_040--Hb_001155_040 Hb_001221_310 Hb_001221_310 Hb_006452_040--Hb_001221_310 Hb_006452_040--Hb_005463_140 Hb_001461_010 Hb_001461_010 Hb_027073_050--Hb_001461_010 Hb_027073_050--Hb_006569_100 Hb_002918_290 Hb_002918_290 Hb_027073_050--Hb_002918_290 Hb_001904_090 Hb_001904_090 Hb_027073_050--Hb_001904_090 Hb_001191_090 Hb_001191_090 Hb_027073_050--Hb_001191_090 Hb_017413_010 Hb_017413_010 Hb_027073_050--Hb_017413_010 Hb_000069_550--Hb_006569_100 Hb_007594_120 Hb_007594_120 Hb_000069_550--Hb_007594_120 Hb_002603_150 Hb_002603_150 Hb_000069_550--Hb_002603_150 Hb_002876_120 Hb_002876_120 Hb_000069_550--Hb_002876_120 Hb_017948_010 Hb_017948_010 Hb_000069_550--Hb_017948_010 Hb_000069_550--Hb_001191_090 Hb_001314_040 Hb_001314_040 Hb_006569_100--Hb_001314_040 Hb_020419_020 Hb_020419_020 Hb_006569_100--Hb_020419_020 Hb_068056_030 Hb_068056_030 Hb_006569_100--Hb_068056_030 Hb_006569_100--Hb_001519_030 Hb_001008_090 Hb_001008_090 Hb_006569_100--Hb_001008_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.59507 0.186911 0.562737 4.08111 1.98916 0.912912
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.27742 6.96497 5.01039 1.75765 1.36585

CAGE analysis