Hb_000002_040

Information

Type -
Description -
Location Contig2: 49187-56466
Sequence    

Annotation

kegg
ID rcu:RCOM_0152200
description hypothetical protein
nr
ID KDP45011.1
description hypothetical protein JCGZ_01511 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L972
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01511 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_20061: 47965-55223 , PASA_asmbl_20062: 48135-55223 , PASA_asmbl_20063: 47899-48598
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000002_040 0.0 - - hypothetical protein JCGZ_01511 [Jatropha curcas]
2 Hb_002042_140 0.0591481643 - - PREDICTED: uncharacterized protein LOC105647570 [Jatropha curcas]
3 Hb_000107_500 0.0648761018 - - PREDICTED: protein FAR1-RELATED SEQUENCE 9 [Jatropha curcas]
4 Hb_000794_050 0.0675318882 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 12 [Jatropha curcas]
5 Hb_003609_030 0.0688549731 - - PREDICTED: autophagy-related protein 18f [Jatropha curcas]
6 Hb_000617_240 0.0704496293 - - PREDICTED: uncharacterized protein LOC105647502 [Jatropha curcas]
7 Hb_000139_090 0.0708639688 - - PREDICTED: protein TIME FOR COFFEE isoform X3 [Jatropha curcas]
8 Hb_001541_020 0.073055716 - - PREDICTED: uncharacterized protein At3g49055 [Jatropha curcas]
9 Hb_005532_050 0.0733131723 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
10 Hb_002221_050 0.0733741616 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP65 isoform X1 [Jatropha curcas]
11 Hb_006831_110 0.0744548987 - - PREDICTED: uncharacterized WD repeat-containing protein C2A9.03-like [Jatropha curcas]
12 Hb_031042_070 0.0749698237 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001718_090 0.0752934782 - - PREDICTED: coiled-coil domain-containing protein 97 [Jatropha curcas]
14 Hb_000025_360 0.0766237553 - - PREDICTED: protein SMG7 isoform X1 [Jatropha curcas]
15 Hb_009411_010 0.0775008541 - - PREDICTED: uncharacterized protein LOC105645272 [Jatropha curcas]
16 Hb_045793_010 0.0776982176 - - PREDICTED: putative disease resistance protein RGA3 [Pyrus x bretschneideri]
17 Hb_000926_190 0.0777442886 - - PREDICTED: 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic isoform X2 [Jatropha curcas]
18 Hb_010931_080 0.0779909661 - - PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Jatropha curcas]
19 Hb_001235_200 0.0782211957 - - conserved hypothetical protein [Ricinus communis]
20 Hb_003935_030 0.078579673 - - PREDICTED: 14-3-3-like protein GF14 kappa isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000002_040 Hb_000002_040 Hb_002042_140 Hb_002042_140 Hb_000002_040--Hb_002042_140 Hb_000107_500 Hb_000107_500 Hb_000002_040--Hb_000107_500 Hb_000794_050 Hb_000794_050 Hb_000002_040--Hb_000794_050 Hb_003609_030 Hb_003609_030 Hb_000002_040--Hb_003609_030 Hb_000617_240 Hb_000617_240 Hb_000002_040--Hb_000617_240 Hb_000139_090 Hb_000139_090 Hb_000002_040--Hb_000139_090 Hb_006831_110 Hb_006831_110 Hb_002042_140--Hb_006831_110 Hb_004128_050 Hb_004128_050 Hb_002042_140--Hb_004128_050 Hb_010695_020 Hb_010695_020 Hb_002042_140--Hb_010695_020 Hb_000743_040 Hb_000743_040 Hb_002042_140--Hb_000743_040 Hb_007558_120 Hb_007558_120 Hb_002042_140--Hb_007558_120 Hb_000283_070 Hb_000283_070 Hb_000107_500--Hb_000283_070 Hb_001541_020 Hb_001541_020 Hb_000107_500--Hb_001541_020 Hb_000107_500--Hb_006831_110 Hb_000510_310 Hb_000510_310 Hb_000107_500--Hb_000510_310 Hb_000025_360 Hb_000025_360 Hb_000107_500--Hb_000025_360 Hb_000368_020 Hb_000368_020 Hb_000794_050--Hb_000368_020 Hb_000926_190 Hb_000926_190 Hb_000794_050--Hb_000926_190 Hb_033720_010 Hb_033720_010 Hb_000794_050--Hb_033720_010 Hb_001390_110 Hb_001390_110 Hb_000794_050--Hb_001390_110 Hb_000853_230 Hb_000853_230 Hb_000794_050--Hb_000853_230 Hb_006620_020 Hb_006620_020 Hb_000794_050--Hb_006620_020 Hb_005993_050 Hb_005993_050 Hb_003609_030--Hb_005993_050 Hb_000562_090 Hb_000562_090 Hb_003609_030--Hb_000562_090 Hb_001252_010 Hb_001252_010 Hb_003609_030--Hb_001252_010 Hb_031527_020 Hb_031527_020 Hb_003609_030--Hb_031527_020 Hb_000179_030 Hb_000179_030 Hb_003609_030--Hb_000179_030 Hb_000502_050 Hb_000502_050 Hb_003609_030--Hb_000502_050 Hb_016461_010 Hb_016461_010 Hb_000617_240--Hb_016461_010 Hb_000390_180 Hb_000390_180 Hb_000617_240--Hb_000390_180 Hb_000617_240--Hb_000794_050 Hb_000120_270 Hb_000120_270 Hb_000617_240--Hb_000120_270 Hb_000498_010 Hb_000498_010 Hb_000617_240--Hb_000498_010 Hb_000174_220 Hb_000174_220 Hb_000139_090--Hb_000174_220 Hb_001247_070 Hb_001247_070 Hb_000139_090--Hb_001247_070 Hb_002524_040 Hb_002524_040 Hb_000139_090--Hb_002524_040 Hb_007576_120 Hb_007576_120 Hb_000139_090--Hb_007576_120 Hb_015807_070 Hb_015807_070 Hb_000139_090--Hb_015807_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
20.9717 16.5655 8.33894 6.07008 18.0471 21.0147
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.7224 9.25063 11.2039 9.77506 9.17677

CAGE analysis