Hb_000002_420

Information

Type -
Description -
Location Contig2: 606566-609461
Sequence    

Annotation

kegg
ID cit:102626742
description serine/threonine-protein kinase BLUS1-like
nr
ID XP_006489553.1
description PREDICTED: serine/threonine-protein kinase BLUS1-like [Citrus sinensis]
swissprot
ID O23304
description Serine/threonine-protein kinase BLUS1 OS=Arabidopsis thaliana GN=BLUS1 PE=1 SV=1
trembl
ID B9STK0
description Serine/threonine protein kinase, putative OS=Ricinus communis GN=RCOM_0492570 PE=4 SV=1
Gene Ontology
ID GO:0000166
description serine threonine-protein kinase blus1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_20113: 609077-610268
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000002_420 0.0 - - PREDICTED: serine/threonine-protein kinase BLUS1-like [Citrus sinensis]
2 Hb_001733_060 0.2600008494 - - PREDICTED: uncharacterized protein LOC104431099 [Eucalyptus grandis]
3 Hb_007765_120 0.2676976424 - - glycogen phosphorylase, putative [Ricinus communis]
4 Hb_033222_010 0.2701192258 - - PREDICTED: uncharacterized protein LOC105173350 [Sesamum indicum]
5 Hb_000184_100 0.2964843662 - - IMP dehydrogenase/GMP reductase [Hevea brasiliensis]
6 Hb_137461_010 0.2972780492 - - hypothetical protein POPTR_0011s03680g [Populus trichocarpa]
7 Hb_003964_090 0.3015121536 - - PREDICTED: 14-3-3-like protein GF14 iota [Jatropha curcas]
8 Hb_027472_030 0.30199052 - - RNA helicase 36, partial [Manihot esculenta]
9 Hb_049944_010 0.3103751893 - - transducin family protein [Populus trichocarpa]
10 Hb_012218_020 0.3194704727 - - hypothetical protein JCGZ_14688 [Jatropha curcas]
11 Hb_000563_270 0.3227986847 - - -
12 Hb_003124_210 0.3238610355 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000347_330 0.3256381823 - - hypothetical protein AMTR_s00420p00013340 [Amborella trichopoda]
14 Hb_005839_050 0.3259371583 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
15 Hb_000832_240 0.3274632094 - - conserved hypothetical protein [Ricinus communis]
16 Hb_171529_010 0.3285978597 - - -
17 Hb_012052_010 0.3311922905 - - PREDICTED: uncharacterized protein LOC103323653 [Prunus mume]
18 Hb_000493_010 0.3322492488 - - hypothetical protein CICLE_v10021431mg [Citrus clementina]
19 Hb_000028_210 0.3332287035 - - hypothetical protein CISIN_1g0103302mg, partial [Citrus sinensis]
20 Hb_112046_010 0.3357828014 - - PREDICTED: uncharacterized protein LOC105772042 [Gossypium raimondii]

Gene co-expression network

sample Hb_000002_420 Hb_000002_420 Hb_001733_060 Hb_001733_060 Hb_000002_420--Hb_001733_060 Hb_007765_120 Hb_007765_120 Hb_000002_420--Hb_007765_120 Hb_033222_010 Hb_033222_010 Hb_000002_420--Hb_033222_010 Hb_000184_100 Hb_000184_100 Hb_000002_420--Hb_000184_100 Hb_137461_010 Hb_137461_010 Hb_000002_420--Hb_137461_010 Hb_003964_090 Hb_003964_090 Hb_000002_420--Hb_003964_090 Hb_001233_040 Hb_001233_040 Hb_001733_060--Hb_001233_040 Hb_049944_010 Hb_049944_010 Hb_001733_060--Hb_049944_010 Hb_001733_060--Hb_137461_010 Hb_001912_070 Hb_001912_070 Hb_001733_060--Hb_001912_070 Hb_000016_120 Hb_000016_120 Hb_001733_060--Hb_000016_120 Hb_005199_010 Hb_005199_010 Hb_007765_120--Hb_005199_010 Hb_007290_080 Hb_007290_080 Hb_007765_120--Hb_007290_080 Hb_002713_080 Hb_002713_080 Hb_007765_120--Hb_002713_080 Hb_148909_020 Hb_148909_020 Hb_007765_120--Hb_148909_020 Hb_015978_070 Hb_015978_070 Hb_007765_120--Hb_015978_070 Hb_007765_120--Hb_000184_100 Hb_000227_050 Hb_000227_050 Hb_033222_010--Hb_000227_050 Hb_012218_020 Hb_012218_020 Hb_033222_010--Hb_012218_020 Hb_000028_210 Hb_000028_210 Hb_033222_010--Hb_000028_210 Hb_001723_050 Hb_001723_050 Hb_033222_010--Hb_001723_050 Hb_000160_160 Hb_000160_160 Hb_033222_010--Hb_000160_160 Hb_023711_010 Hb_023711_010 Hb_000184_100--Hb_023711_010 Hb_001789_130 Hb_001789_130 Hb_000184_100--Hb_001789_130 Hb_004800_120 Hb_004800_120 Hb_000184_100--Hb_004800_120 Hb_004976_070 Hb_004976_070 Hb_000184_100--Hb_004976_070 Hb_000347_330 Hb_000347_330 Hb_000184_100--Hb_000347_330 Hb_000184_100--Hb_007290_080 Hb_005916_030 Hb_005916_030 Hb_137461_010--Hb_005916_030 Hb_137461_010--Hb_049944_010 Hb_000575_080 Hb_000575_080 Hb_137461_010--Hb_000575_080 Hb_075964_010 Hb_075964_010 Hb_137461_010--Hb_075964_010 Hb_000062_420 Hb_000062_420 Hb_137461_010--Hb_000062_420 Hb_137461_010--Hb_001912_070 Hb_005839_050 Hb_005839_050 Hb_003964_090--Hb_005839_050 Hb_003964_090--Hb_049944_010 Hb_012052_010 Hb_012052_010 Hb_003964_090--Hb_012052_010 Hb_001427_060 Hb_001427_060 Hb_003964_090--Hb_001427_060 Hb_013818_050 Hb_013818_050 Hb_003964_090--Hb_013818_050 Hb_000656_100 Hb_000656_100 Hb_003964_090--Hb_000656_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0427111 0.0218736 0.021106 0 0.275876
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.195476 0.205044 0 0.0307078 0.107072

CAGE analysis