Hb_000002_430

Information

Type -
Description -
Location Contig2: 610139-611302
Sequence    

Annotation

kegg
ID pop:POPTR_0010s08570g
description POPTRDRAFT_566125; forkhead-associated domain-containing family protein
nr
ID XP_011030537.1
description PREDICTED: FHA domain-containing protein At4g14490 [Populus euphratica]
swissprot
ID O23305
description FHA domain-containing protein At4g14490 OS=Arabidopsis thaliana GN=At4g14490 PE=1 SV=1
trembl
ID A0A067L884
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02287 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_20113: 609077-610268
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000002_430 0.0 - - PREDICTED: FHA domain-containing protein At4g14490 [Populus euphratica]
2 Hb_000416_080 0.0938159618 - - Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase, putative [Ricinus communis]
3 Hb_001864_040 0.118113813 - - PREDICTED: kinesin-1 [Jatropha curcas]
4 Hb_000265_100 0.1241460524 - - PREDICTED: uncharacterized protein LOC105643473 [Jatropha curcas]
5 Hb_004635_020 0.1245144507 - - PREDICTED: uncharacterized protein At3g28850-like [Jatropha curcas]
6 Hb_003935_090 0.1245466245 - - PREDICTED: uncharacterized protein At4g38062 [Jatropha curcas]
7 Hb_033152_060 0.1314974949 - - PREDICTED: phragmoplast orienting kinesin 2 [Jatropha curcas]
8 Hb_004102_090 0.1321110665 transcription factor TF Family: CPP hypothetical protein JCGZ_06186 [Jatropha curcas]
9 Hb_010705_040 0.1323398053 - - PREDICTED: kinesin-4 [Jatropha curcas]
10 Hb_002205_180 0.1352224134 - - PREDICTED: uncharacterized protein LOC105649178 [Jatropha curcas]
11 Hb_004079_090 0.1353496372 - - hypothetical protein RCOM_1053120 [Ricinus communis]
12 Hb_002811_210 0.1365704177 - - PREDICTED: serine/threonine-protein kinase Nek1 isoform X1 [Jatropha curcas]
13 Hb_000316_070 0.1394965122 - - PREDICTED: actin-1-like isoform X2 [Cucumis melo]
14 Hb_000028_530 0.1443598741 - - Protein regulator of cytokinesis, putative [Ricinus communis]
15 Hb_001969_120 0.1459075501 - - PREDICTED: plectin [Jatropha curcas]
16 Hb_003109_010 0.1465298194 - - PREDICTED: kinesin-like protein KIN12B [Jatropha curcas]
17 Hb_002232_310 0.1474648604 - - PREDICTED: uncharacterized protein LOC105635987 [Jatropha curcas]
18 Hb_001755_040 0.1475671015 - - PREDICTED: cyclin-A2-4-like isoform X1 [Jatropha curcas]
19 Hb_000441_210 0.1481716145 - - PREDICTED: uncharacterized protein LOC105636842 [Jatropha curcas]
20 Hb_004963_020 0.1495699289 - - PREDICTED: patellin-4 [Populus euphratica]

Gene co-expression network

sample Hb_000002_430 Hb_000002_430 Hb_000416_080 Hb_000416_080 Hb_000002_430--Hb_000416_080 Hb_001864_040 Hb_001864_040 Hb_000002_430--Hb_001864_040 Hb_000265_100 Hb_000265_100 Hb_000002_430--Hb_000265_100 Hb_004635_020 Hb_004635_020 Hb_000002_430--Hb_004635_020 Hb_003935_090 Hb_003935_090 Hb_000002_430--Hb_003935_090 Hb_033152_060 Hb_033152_060 Hb_000002_430--Hb_033152_060 Hb_001969_120 Hb_001969_120 Hb_000416_080--Hb_001969_120 Hb_000340_550 Hb_000340_550 Hb_000416_080--Hb_000340_550 Hb_003776_050 Hb_003776_050 Hb_000416_080--Hb_003776_050 Hb_005618_070 Hb_005618_070 Hb_000416_080--Hb_005618_070 Hb_011849_010 Hb_011849_010 Hb_000416_080--Hb_011849_010 Hb_004963_020 Hb_004963_020 Hb_001864_040--Hb_004963_020 Hb_000316_070 Hb_000316_070 Hb_001864_040--Hb_000316_070 Hb_007558_110 Hb_007558_110 Hb_001864_040--Hb_007558_110 Hb_002473_030 Hb_002473_030 Hb_001864_040--Hb_002473_030 Hb_001864_040--Hb_004635_020 Hb_001864_040--Hb_033152_060 Hb_000028_530 Hb_000028_530 Hb_000265_100--Hb_000028_530 Hb_000334_120 Hb_000334_120 Hb_000265_100--Hb_000334_120 Hb_010705_040 Hb_010705_040 Hb_000265_100--Hb_010705_040 Hb_002374_090 Hb_002374_090 Hb_000265_100--Hb_002374_090 Hb_000265_100--Hb_004963_020 Hb_000265_100--Hb_002473_030 Hb_004635_020--Hb_000316_070 Hb_000856_390 Hb_000856_390 Hb_004635_020--Hb_000856_390 Hb_000085_360 Hb_000085_360 Hb_004635_020--Hb_000085_360 Hb_080952_060 Hb_080952_060 Hb_004635_020--Hb_080952_060 Hb_119044_040 Hb_119044_040 Hb_004635_020--Hb_119044_040 Hb_007245_030 Hb_007245_030 Hb_004635_020--Hb_007245_030 Hb_007574_020 Hb_007574_020 Hb_003935_090--Hb_007574_020 Hb_002232_310 Hb_002232_310 Hb_003935_090--Hb_002232_310 Hb_004109_100 Hb_004109_100 Hb_003935_090--Hb_004109_100 Hb_001755_040 Hb_001755_040 Hb_003935_090--Hb_001755_040 Hb_012055_080 Hb_012055_080 Hb_003935_090--Hb_012055_080 Hb_023344_100 Hb_023344_100 Hb_003935_090--Hb_023344_100 Hb_000189_350 Hb_000189_350 Hb_033152_060--Hb_000189_350 Hb_033152_060--Hb_000316_070 Hb_002205_180 Hb_002205_180 Hb_033152_060--Hb_002205_180 Hb_027905_040 Hb_027905_040 Hb_033152_060--Hb_027905_040 Hb_033152_060--Hb_004635_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.220797 0.137967 6.30541 2.31263 0.0357213 0.265598
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0420809 0 0 0.451095 0.478694

CAGE analysis