Hb_000005_400

Information

Type -
Description -
Location Contig5: 516331-524004
Sequence    

Annotation

kegg
ID rcu:RCOM_0485090
description CBL-interacting serine/threonine-protein kinase, putative (EC:2.7.11.17)
nr
ID XP_012072157.1
description PREDICTED: CBL-interacting serine/threonine-protein kinase 23 isoform X2 [Jatropha curcas]
swissprot
ID Q93VD3
description CBL-interacting serine/threonine-protein kinase 23 OS=Arabidopsis thaliana GN=CIPK23 PE=1 SV=1
trembl
ID A0A067KSM5
description Non-specific serine/threonine protein kinase OS=Jatropha curcas GN=JCGZ_04651 PE=4 SV=1
Gene Ontology
ID GO:0005634
description cbl-interacting serine threonine-protein kinase 23 isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000005_400 0.0 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 23 isoform X2 [Jatropha curcas]
2 Hb_007553_010 0.1548645382 - - -
3 Hb_000042_360 0.1626449821 - - conserved hypothetical protein [Ricinus communis]
4 Hb_162275_020 0.1897077958 - - phosphate transporter [Manihot esculenta]
5 Hb_000270_740 0.2088826157 - - PREDICTED: probable inactive receptor kinase At2g26730 [Jatropha curcas]
6 Hb_158104_020 0.2173372207 - - PREDICTED: coiled-coil domain-containing protein 12 [Jatropha curcas]
7 Hb_003502_100 0.2384969968 - - -
8 Hb_007441_240 0.2407785377 - - ethphon-induced protein [Hevea brasiliensis]
9 Hb_000732_210 0.2496029666 - - hexose transporter 1 [Hevea brasiliensis]
10 Hb_006538_190 0.2507540151 - - PREDICTED: homocysteine S-methyltransferase 1 isoform X1 [Jatropha curcas]
11 Hb_005245_070 0.257673861 - - PREDICTED: uncharacterized protein LOC105643658 [Jatropha curcas]
12 Hb_002900_130 0.2592247816 - - 60S ribosomal L35a-3 -like protein [Gossypium arboreum]
13 Hb_017170_030 0.2599280946 - - PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal-like [Jatropha curcas]
14 Hb_116420_020 0.2630149336 - - Phytosulfokines 3 precursor family protein [Populus trichocarpa]
15 Hb_007317_080 0.2645888919 - - PREDICTED: ferredoxin, root R-B2 [Jatropha curcas]
16 Hb_006816_270 0.2651561552 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001635_130 0.2671604676 - - PREDICTED: 60S ribosomal protein L28-2-like [Jatropha curcas]
18 Hb_000049_050 0.2674650061 - - PREDICTED: uncharacterized protein LOC105644474 [Jatropha curcas]
19 Hb_002609_160 0.2675423913 - - PREDICTED: GDP-mannose transporter GONST2 [Jatropha curcas]
20 Hb_032972_010 0.2694546575 - - Glycolipid transfer protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000005_400 Hb_000005_400 Hb_007553_010 Hb_007553_010 Hb_000005_400--Hb_007553_010 Hb_000042_360 Hb_000042_360 Hb_000005_400--Hb_000042_360 Hb_162275_020 Hb_162275_020 Hb_000005_400--Hb_162275_020 Hb_000270_740 Hb_000270_740 Hb_000005_400--Hb_000270_740 Hb_158104_020 Hb_158104_020 Hb_000005_400--Hb_158104_020 Hb_003502_100 Hb_003502_100 Hb_000005_400--Hb_003502_100 Hb_005245_070 Hb_005245_070 Hb_007553_010--Hb_005245_070 Hb_007553_010--Hb_162275_020 Hb_007553_010--Hb_003502_100 Hb_000049_050 Hb_000049_050 Hb_007553_010--Hb_000049_050 Hb_000260_790 Hb_000260_790 Hb_007553_010--Hb_000260_790 Hb_007441_240 Hb_007441_240 Hb_000042_360--Hb_007441_240 Hb_000042_360--Hb_000270_740 Hb_000116_040 Hb_000116_040 Hb_000042_360--Hb_000116_040 Hb_002900_130 Hb_002900_130 Hb_000042_360--Hb_002900_130 Hb_001635_130 Hb_001635_130 Hb_000042_360--Hb_001635_130 Hb_017170_030 Hb_017170_030 Hb_162275_020--Hb_017170_030 Hb_000297_020 Hb_000297_020 Hb_162275_020--Hb_000297_020 Hb_006538_190 Hb_006538_190 Hb_162275_020--Hb_006538_190 Hb_000614_170 Hb_000614_170 Hb_162275_020--Hb_000614_170 Hb_000732_210 Hb_000732_210 Hb_162275_020--Hb_000732_210 Hb_000270_740--Hb_007441_240 Hb_004787_040 Hb_004787_040 Hb_000270_740--Hb_004787_040 Hb_000739_140 Hb_000739_140 Hb_000270_740--Hb_000739_140 Hb_000768_130 Hb_000768_130 Hb_000270_740--Hb_000768_130 Hb_000270_740--Hb_158104_020 Hb_000382_020 Hb_000382_020 Hb_000270_740--Hb_000382_020 Hb_000317_420 Hb_000317_420 Hb_158104_020--Hb_000317_420 Hb_158104_020--Hb_007441_240 Hb_000407_070 Hb_000407_070 Hb_158104_020--Hb_000407_070 Hb_028049_010 Hb_028049_010 Hb_158104_020--Hb_028049_010 Hb_000723_170 Hb_000723_170 Hb_158104_020--Hb_000723_170 Hb_003502_100--Hb_005245_070 Hb_004128_040 Hb_004128_040 Hb_003502_100--Hb_004128_040 Hb_000975_180 Hb_000975_180 Hb_003502_100--Hb_000975_180 Hb_001842_050 Hb_001842_050 Hb_003502_100--Hb_001842_050 Hb_000367_030 Hb_000367_030 Hb_003502_100--Hb_000367_030 Hb_009778_040 Hb_009778_040 Hb_003502_100--Hb_009778_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.151966 0.0373501 0.129564 1.25604 0 0.0197936
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.719739 1.31459 0.344006 0.974753 0.0425846

CAGE analysis