Hb_000007_110

Information

Type -
Description -
Location Contig7: 113055-114535
Sequence    

Annotation

kegg
ID pop:POPTR_0010s14460g
description POPTRDRAFT_882913; Peroxidase 11 precursor family protein
nr
ID XP_012080575.1
description PREDICTED: peroxidase 11 [Jatropha curcas]
swissprot
ID Q96519
description Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1
trembl
ID W8PWG5
description Peroxidase OS=Populus trichocarpa GN=PRX56 PE=2 SV=1
Gene Ontology
ID GO:0005576
description peroxidase 11

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54733: 113899-114452
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000007_110 0.0 - - PREDICTED: peroxidase 11 [Jatropha curcas]
2 Hb_000135_050 0.154378595 - - PREDICTED: putative leucine-rich repeat receptor-like protein kinase At2g19210-like isoform X2 [Citrus sinensis]
3 Hb_000010_120 0.1555557746 - - PREDICTED: cytochrome P450 71A26-like [Jatropha curcas]
4 Hb_159769_010 0.1591755476 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Jatropha curcas]
5 Hb_176979_010 0.1797578306 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
6 Hb_006478_180 0.1818663221 - - Nonspecific lipid-transfer protein precursor, putative [Ricinus communis]
7 Hb_003538_020 0.1865599417 - - (S)-N-methylcoclaurine 3'-hydroxylase isozyme, putative [Ricinus communis]
8 Hb_000189_260 0.1866941476 - - conserved hypothetical protein [Ricinus communis]
9 Hb_002758_040 0.1867307773 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
10 Hb_000281_200 0.1869964058 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Jatropha curcas]
11 Hb_027445_090 0.1897581772 - - oleosin 18.2 kDa-like [Jatropha curcas]
12 Hb_008092_090 0.1914929657 - - PREDICTED: uncharacterized protein LOC105637756 [Jatropha curcas]
13 Hb_000140_160 0.1933590668 - - PREDICTED: neurofilament light polypeptide-like [Gossypium raimondii]
14 Hb_112082_030 0.1960056782 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
15 Hb_039655_010 0.1963943162 - - PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like [Malus domestica]
16 Hb_027402_120 0.1970882816 - - zinc finger protein, putative [Ricinus communis]
17 Hb_003428_100 0.1973003079 - - Polygalacturonase precursor, putative [Ricinus communis]
18 Hb_030291_030 0.1977378026 - - PREDICTED: agmatine coumaroyltransferase-2-like [Jatropha curcas]
19 Hb_002325_020 0.1979102398 - - zinc finger protein, putative [Ricinus communis]
20 Hb_000648_120 0.1985846651 - - PREDICTED: L-type lectin-domain containing receptor kinase IV.1 [Vitis vinifera]

Gene co-expression network

sample Hb_000007_110 Hb_000007_110 Hb_000135_050 Hb_000135_050 Hb_000007_110--Hb_000135_050 Hb_000010_120 Hb_000010_120 Hb_000007_110--Hb_000010_120 Hb_159769_010 Hb_159769_010 Hb_000007_110--Hb_159769_010 Hb_176979_010 Hb_176979_010 Hb_000007_110--Hb_176979_010 Hb_006478_180 Hb_006478_180 Hb_000007_110--Hb_006478_180 Hb_003538_020 Hb_003538_020 Hb_000007_110--Hb_003538_020 Hb_000281_200 Hb_000281_200 Hb_000135_050--Hb_000281_200 Hb_000648_120 Hb_000648_120 Hb_000135_050--Hb_000648_120 Hb_000189_260 Hb_000189_260 Hb_000135_050--Hb_000189_260 Hb_000135_050--Hb_159769_010 Hb_011486_030 Hb_011486_030 Hb_000135_050--Hb_011486_030 Hb_020332_040 Hb_020332_040 Hb_000135_050--Hb_020332_040 Hb_000010_120--Hb_006478_180 Hb_002325_020 Hb_002325_020 Hb_000010_120--Hb_002325_020 Hb_002758_040 Hb_002758_040 Hb_000010_120--Hb_002758_040 Hb_011382_030 Hb_011382_030 Hb_000010_120--Hb_011382_030 Hb_001999_220 Hb_001999_220 Hb_000010_120--Hb_001999_220 Hb_039655_010 Hb_039655_010 Hb_159769_010--Hb_039655_010 Hb_159769_010--Hb_000281_200 Hb_022250_050 Hb_022250_050 Hb_159769_010--Hb_022250_050 Hb_005356_010 Hb_005356_010 Hb_159769_010--Hb_005356_010 Hb_007527_020 Hb_007527_020 Hb_159769_010--Hb_007527_020 Hb_146023_010 Hb_146023_010 Hb_176979_010--Hb_146023_010 Hb_064885_050 Hb_064885_050 Hb_176979_010--Hb_064885_050 Hb_125644_010 Hb_125644_010 Hb_176979_010--Hb_125644_010 Hb_002917_010 Hb_002917_010 Hb_176979_010--Hb_002917_010 Hb_001442_080 Hb_001442_080 Hb_176979_010--Hb_001442_080 Hb_000939_030 Hb_000939_030 Hb_176979_010--Hb_000939_030 Hb_006478_180--Hb_003538_020 Hb_006478_180--Hb_002758_040 Hb_132880_030 Hb_132880_030 Hb_006478_180--Hb_132880_030 Hb_112082_030 Hb_112082_030 Hb_006478_180--Hb_112082_030 Hb_005511_050 Hb_005511_050 Hb_006478_180--Hb_005511_050 Hb_002534_080 Hb_002534_080 Hb_003538_020--Hb_002534_080 Hb_003891_060 Hb_003891_060 Hb_003538_020--Hb_003891_060 Hb_003538_020--Hb_112082_030 Hb_003538_020--Hb_005511_050 Hb_003538_020--Hb_002758_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.156411 0.767213 0.0310588 0.261947 0.0378447 0.0217943
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.138567 0.21798 0.268741 7.33616 0.0747037

CAGE analysis