Hb_000008_080

Information

Type -
Description -
Location Contig8: 73584-74066
Sequence    

Annotation

kegg
ID rcu:RCOM_0033800
description hypothetical protein
nr
ID XP_002529930.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SVB1
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0033800 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000008_080 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000163_250 0.0956300045 - - unnamed protein product [Vitis vinifera]
3 Hb_001894_040 0.1023973188 - - PREDICTED: carbonic anhydrase 2 isoform X1 [Jatropha curcas]
4 Hb_000359_280 0.1073999255 - - hypothetical protein OsI_15300 [Oryza sativa Indica Group]
5 Hb_001636_010 0.1100502056 - - hypothetical protein JCGZ_01264 [Jatropha curcas]
6 Hb_001102_270 0.1106349467 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Jatropha curcas]
7 Hb_000085_230 0.1137697175 - - PREDICTED: probable long-chain-alcohol O-fatty-acyltransferase 5 [Jatropha curcas]
8 Hb_187991_010 0.1170193972 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
9 Hb_075449_040 0.1214648626 - - PREDICTED: meiotic recombination protein SPO11-1 [Jatropha curcas]
10 Hb_020285_010 0.1228143939 - - PREDICTED: putative serine/threonine-protein kinase-like protein CCR3, partial [Pyrus x bretschneideri]
11 Hb_046101_010 0.1244673558 - - PREDICTED: putative serine/threonine-protein kinase-like protein CCR3 [Jatropha curcas]
12 Hb_007765_140 0.1273953783 - - PREDICTED: protein NRT1/ PTR FAMILY 8.1-like [Jatropha curcas]
13 Hb_000836_390 0.1287581566 - - PREDICTED: neurofilament light polypeptide-like [Gossypium raimondii]
14 Hb_063523_010 0.1299377273 - - -
15 Hb_033045_010 0.1313455398 - - copine, putative [Ricinus communis]
16 Hb_008783_020 0.1322988551 - - hypothetical protein JCGZ_21284 [Jatropha curcas]
17 Hb_031862_020 0.1340326942 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]
18 Hb_006788_100 0.1356263639 - - PREDICTED: uncharacterized protein LOC105649919 isoform X1 [Jatropha curcas]
19 Hb_001421_010 0.1367039509 transcription factor TF Family: ARR-B PREDICTED: two-component response regulator-like APRR2 isoform X1 [Jatropha curcas]
20 Hb_000120_070 0.1377854135 - - PREDICTED: uncharacterized protein LOC105630351 [Jatropha curcas]

Gene co-expression network

sample Hb_000008_080 Hb_000008_080 Hb_000163_250 Hb_000163_250 Hb_000008_080--Hb_000163_250 Hb_001894_040 Hb_001894_040 Hb_000008_080--Hb_001894_040 Hb_000359_280 Hb_000359_280 Hb_000008_080--Hb_000359_280 Hb_001636_010 Hb_001636_010 Hb_000008_080--Hb_001636_010 Hb_001102_270 Hb_001102_270 Hb_000008_080--Hb_001102_270 Hb_000085_230 Hb_000085_230 Hb_000008_080--Hb_000085_230 Hb_007919_030 Hb_007919_030 Hb_000163_250--Hb_007919_030 Hb_008783_020 Hb_008783_020 Hb_000163_250--Hb_008783_020 Hb_000037_010 Hb_000037_010 Hb_000163_250--Hb_000037_010 Hb_005276_220 Hb_005276_220 Hb_000163_250--Hb_005276_220 Hb_006788_100 Hb_006788_100 Hb_000163_250--Hb_006788_100 Hb_001894_040--Hb_000085_230 Hb_008226_120 Hb_008226_120 Hb_001894_040--Hb_008226_120 Hb_000579_180 Hb_000579_180 Hb_001894_040--Hb_000579_180 Hb_046101_010 Hb_046101_010 Hb_001894_040--Hb_046101_010 Hb_001862_060 Hb_001862_060 Hb_001894_040--Hb_001862_060 Hb_001894_040--Hb_001636_010 Hb_000359_280--Hb_001102_270 Hb_187991_010 Hb_187991_010 Hb_000359_280--Hb_187991_010 Hb_063523_010 Hb_063523_010 Hb_000359_280--Hb_063523_010 Hb_000359_280--Hb_008783_020 Hb_007765_140 Hb_007765_140 Hb_000359_280--Hb_007765_140 Hb_010417_100 Hb_010417_100 Hb_001636_010--Hb_010417_100 Hb_020285_010 Hb_020285_010 Hb_001636_010--Hb_020285_010 Hb_007894_030 Hb_007894_030 Hb_001636_010--Hb_007894_030 Hb_001421_010 Hb_001421_010 Hb_001636_010--Hb_001421_010 Hb_038777_010 Hb_038777_010 Hb_001636_010--Hb_038777_010 Hb_001102_270--Hb_008783_020 Hb_001355_110 Hb_001355_110 Hb_001102_270--Hb_001355_110 Hb_001102_270--Hb_187991_010 Hb_001102_270--Hb_063523_010 Hb_001102_270--Hb_007765_140 Hb_000085_230--Hb_000579_180 Hb_001514_210 Hb_001514_210 Hb_000085_230--Hb_001514_210 Hb_012753_200 Hb_012753_200 Hb_000085_230--Hb_012753_200 Hb_000836_390 Hb_000836_390 Hb_000085_230--Hb_000836_390
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.07087 59.0291 31.0678 18.9489 0.314932 1.18841
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.794009 0 0 54.2562 16.2797

CAGE analysis