Hb_000008_170

Information

Type -
Description -
Location Contig8: 230936-235592
Sequence    

Annotation

kegg
ID pop:POPTR_0009s01610g
description POPTRDRAFT_204391; hypothetical protein
nr
ID XP_012064797.1
description PREDICTED: uncharacterized protein LOC105628076 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LHF7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05502 PE=4 SV=1
Gene Ontology
ID GO:0016757
description glycosyltransferase family protein 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000008_170 0.0 - - PREDICTED: uncharacterized protein LOC105628076 [Jatropha curcas]
2 Hb_004241_100 0.1258957342 - - PREDICTED: transcription factor bHLH123-like isoform X1 [Populus euphratica]
3 Hb_000375_150 0.1393722984 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000201_070 0.1418920247 - - hypothetical protein POPTR_0067s00200g [Populus trichocarpa]
5 Hb_000329_170 0.1421758168 - - PREDICTED: cysteine-rich repeat secretory protein 15 [Jatropha curcas]
6 Hb_013691_060 0.1421784149 - - PREDICTED: uncharacterized protein LOC105119066 [Populus euphratica]
7 Hb_005714_140 0.142530566 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
8 Hb_155015_020 0.144410843 - - PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
9 Hb_000181_390 0.1478778764 - - unknown [Lotus japonicus]
10 Hb_172240_010 0.150344862 - - PREDICTED: uncharacterized protein LOC105795660 [Gossypium raimondii]
11 Hb_113396_010 0.1569264196 - - cytochrome P450, putative [Ricinus communis]
12 Hb_002811_320 0.1609000288 - - cation-transporting atpase plant, putative [Ricinus communis]
13 Hb_160576_010 0.1622005636 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
14 Hb_001098_020 0.1636095216 - - PREDICTED: transcription factor bHLH123-like isoform X1 [Populus euphratica]
15 Hb_002218_080 0.1643522079 - - Ankyrin repeat family protein, putative [Theobroma cacao]
16 Hb_002110_050 0.1648729105 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001257_120 0.166075338 - - PREDICTED: probable CCR4-associated factor 1 homolog 9 [Jatropha curcas]
18 Hb_000325_070 0.1686464808 - - ABC transporter family protein [Hevea brasiliensis]
19 Hb_000365_190 0.1688977134 - - PREDICTED: protein LURP-one-related 8 [Jatropha curcas]
20 Hb_000060_100 0.170898165 transcription factor TF Family: OFP conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000008_170 Hb_000008_170 Hb_004241_100 Hb_004241_100 Hb_000008_170--Hb_004241_100 Hb_000375_150 Hb_000375_150 Hb_000008_170--Hb_000375_150 Hb_000201_070 Hb_000201_070 Hb_000008_170--Hb_000201_070 Hb_000329_170 Hb_000329_170 Hb_000008_170--Hb_000329_170 Hb_013691_060 Hb_013691_060 Hb_000008_170--Hb_013691_060 Hb_005714_140 Hb_005714_140 Hb_000008_170--Hb_005714_140 Hb_002110_050 Hb_002110_050 Hb_004241_100--Hb_002110_050 Hb_002548_020 Hb_002548_020 Hb_004241_100--Hb_002548_020 Hb_002218_080 Hb_002218_080 Hb_004241_100--Hb_002218_080 Hb_155015_020 Hb_155015_020 Hb_004241_100--Hb_155015_020 Hb_002811_320 Hb_002811_320 Hb_004241_100--Hb_002811_320 Hb_000032_230 Hb_000032_230 Hb_004241_100--Hb_000032_230 Hb_000375_150--Hb_000329_170 Hb_005694_150 Hb_005694_150 Hb_000375_150--Hb_005694_150 Hb_000325_070 Hb_000325_070 Hb_000375_150--Hb_000325_070 Hb_002725_080 Hb_002725_080 Hb_000375_150--Hb_002725_080 Hb_000181_390 Hb_000181_390 Hb_000375_150--Hb_000181_390 Hb_050847_030 Hb_050847_030 Hb_000375_150--Hb_050847_030 Hb_010267_030 Hb_010267_030 Hb_000201_070--Hb_010267_030 Hb_006951_010 Hb_006951_010 Hb_000201_070--Hb_006951_010 Hb_112145_010 Hb_112145_010 Hb_000201_070--Hb_112145_010 Hb_000201_070--Hb_155015_020 Hb_172240_010 Hb_172240_010 Hb_000201_070--Hb_172240_010 Hb_002186_030 Hb_002186_030 Hb_000201_070--Hb_002186_030 Hb_001518_030 Hb_001518_030 Hb_000329_170--Hb_001518_030 Hb_000329_170--Hb_002725_080 Hb_005618_010 Hb_005618_010 Hb_000329_170--Hb_005618_010 Hb_026048_030 Hb_026048_030 Hb_000329_170--Hb_026048_030 Hb_024650_010 Hb_024650_010 Hb_000329_170--Hb_024650_010 Hb_000742_260 Hb_000742_260 Hb_013691_060--Hb_000742_260 Hb_013691_060--Hb_005694_150 Hb_000365_190 Hb_000365_190 Hb_013691_060--Hb_000365_190 Hb_013691_060--Hb_000325_070 Hb_113396_010 Hb_113396_010 Hb_013691_060--Hb_113396_010 Hb_013691_060--Hb_000375_150 Hb_000260_130 Hb_000260_130 Hb_005714_140--Hb_000260_130 Hb_002267_030 Hb_002267_030 Hb_005714_140--Hb_002267_030 Hb_000252_190 Hb_000252_190 Hb_005714_140--Hb_000252_190 Hb_002820_090 Hb_002820_090 Hb_005714_140--Hb_002820_090 Hb_004242_160 Hb_004242_160 Hb_005714_140--Hb_004242_160 Hb_000060_100 Hb_000060_100 Hb_005714_140--Hb_000060_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.145548 0.0312031 0.0893503 0 0.00643144
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.02625

CAGE analysis