Hb_000008_190

Information

Type -
Description -
Location Contig8: 272081-280597
Sequence    

Annotation

kegg
ID rcu:RCOM_0034480
description hypothetical protein
nr
ID XP_012064804.1
description PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X2 [Jatropha curcas]
swissprot
ID Q8VZF6
description Protein ENHANCED DISEASE RESISTANCE 2-like OS=Arabidopsis thaliana GN=EDR2L PE=2 SV=1
trembl
ID A0A067L9W7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05505 PE=4 SV=1
Gene Ontology
ID GO:0008289
description protein enhanced disease resistance 2 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58667: 275003-275228 , PASA_asmbl_58668: 277179-280412
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000008_190 0.0 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X2 [Jatropha curcas]
2 Hb_118507_010 0.1001646242 - - hypothetical protein VITISV_019292 [Vitis vinifera]
3 Hb_002486_050 0.1052784655 - - Multiple inositol polyphosphate phosphatase 1 precursor, putative [Ricinus communis]
4 Hb_001195_410 0.1083211432 - - PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase [Jatropha curcas]
5 Hb_004126_040 0.1097303589 - - conserved hypothetical protein [Ricinus communis]
6 Hb_002660_110 0.1117301909 - - PREDICTED: serine/threonine-protein kinase-like protein CCR1 isoform X1 [Jatropha curcas]
7 Hb_001481_150 0.1127579309 - - hypothetical protein POPTR_0001s15440g [Populus trichocarpa]
8 Hb_004525_040 0.1131322837 - - PREDICTED: sugar transporter ERD6-like 6 [Jatropha curcas]
9 Hb_003209_130 0.1140912601 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
10 Hb_000622_110 0.1214323397 - - cmp-sialic acid transporter, putative [Ricinus communis]
11 Hb_004480_020 0.1243792348 - - PREDICTED: uncharacterized protein LOC105637166 [Jatropha curcas]
12 Hb_005535_080 0.1246833642 - - hypothetical protein CICLE_v10012766mg [Citrus clementina]
13 Hb_000002_480 0.1250280479 - - PREDICTED: protein WVD2-like 1 isoform X2 [Jatropha curcas]
14 Hb_007286_020 0.1250903263 - - hypothetical protein L484_010675 [Morus notabilis]
15 Hb_000926_340 0.125951936 - - PREDICTED: EH domain-containing protein 1 isoform X1 [Jatropha curcas]
16 Hb_148130_020 0.1268626416 - - -
17 Hb_010042_020 0.1268734517 - - UDP-n-acteylglucosamine pyrophosphorylase, putative [Ricinus communis]
18 Hb_000256_230 0.1271855812 - - PREDICTED: uncharacterized protein LOC105637594 [Jatropha curcas]
19 Hb_086639_080 0.1289877136 - - conserved hypothetical protein [Ricinus communis]
20 Hb_003052_180 0.130318733 - - Diacylglycerol Cholinephosphotransferase [Ricinus communis]

Gene co-expression network

sample Hb_000008_190 Hb_000008_190 Hb_118507_010 Hb_118507_010 Hb_000008_190--Hb_118507_010 Hb_002486_050 Hb_002486_050 Hb_000008_190--Hb_002486_050 Hb_001195_410 Hb_001195_410 Hb_000008_190--Hb_001195_410 Hb_004126_040 Hb_004126_040 Hb_000008_190--Hb_004126_040 Hb_002660_110 Hb_002660_110 Hb_000008_190--Hb_002660_110 Hb_001481_150 Hb_001481_150 Hb_000008_190--Hb_001481_150 Hb_118507_010--Hb_001195_410 Hb_005539_310 Hb_005539_310 Hb_118507_010--Hb_005539_310 Hb_004480_020 Hb_004480_020 Hb_118507_010--Hb_004480_020 Hb_005535_080 Hb_005535_080 Hb_118507_010--Hb_005535_080 Hb_001124_110 Hb_001124_110 Hb_118507_010--Hb_001124_110 Hb_003209_130 Hb_003209_130 Hb_002486_050--Hb_003209_130 Hb_000256_230 Hb_000256_230 Hb_002486_050--Hb_000256_230 Hb_005062_110 Hb_005062_110 Hb_002486_050--Hb_005062_110 Hb_000622_110 Hb_000622_110 Hb_002486_050--Hb_000622_110 Hb_000665_170 Hb_000665_170 Hb_002486_050--Hb_000665_170 Hb_000085_260 Hb_000085_260 Hb_002486_050--Hb_000085_260 Hb_004453_070 Hb_004453_070 Hb_001195_410--Hb_004453_070 Hb_012760_050 Hb_012760_050 Hb_001195_410--Hb_012760_050 Hb_000172_510 Hb_000172_510 Hb_001195_410--Hb_000172_510 Hb_000776_060 Hb_000776_060 Hb_001195_410--Hb_000776_060 Hb_004126_040--Hb_000256_230 Hb_000389_030 Hb_000389_030 Hb_004126_040--Hb_000389_030 Hb_004126_040--Hb_000665_170 Hb_004126_040--Hb_003209_130 Hb_004126_040--Hb_000622_110 Hb_003878_200 Hb_003878_200 Hb_004126_040--Hb_003878_200 Hb_003052_180 Hb_003052_180 Hb_002660_110--Hb_003052_180 Hb_000622_350 Hb_000622_350 Hb_002660_110--Hb_000622_350 Hb_122636_010 Hb_122636_010 Hb_002660_110--Hb_122636_010 Hb_003071_070 Hb_003071_070 Hb_002660_110--Hb_003071_070 Hb_001609_040 Hb_001609_040 Hb_002660_110--Hb_001609_040 Hb_001481_150--Hb_004480_020 Hb_000928_190 Hb_000928_190 Hb_001481_150--Hb_000928_190 Hb_033152_070 Hb_033152_070 Hb_001481_150--Hb_033152_070 Hb_004525_040 Hb_004525_040 Hb_001481_150--Hb_004525_040 Hb_019280_020 Hb_019280_020 Hb_001481_150--Hb_019280_020 Hb_001006_270 Hb_001006_270 Hb_001481_150--Hb_001006_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.830093 1.63833 1.97306 7.14663 0.774153 1.72024
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.27395 1.27175 0.882917 1.65849 1.55587

CAGE analysis