Hb_000009_250

Information

Type -
Description -
Location Contig9: 266020-267063
Sequence    

Annotation

kegg
ID rcu:RCOM_0411600
description transferase, transferring glycosyl groups, putative
nr
ID XP_002533272.1
description transferase, transferring glycosyl groups, putative [Ricinus communis]
swissprot
ID Q9S7G2
description Probable galacturonosyltransferase-like 2 OS=Arabidopsis thaliana GN=GATL2 PE=2 SV=1
trembl
ID B9T4V3
description Hexosyltransferase OS=Ricinus communis GN=RCOM_0411600 PE=3 SV=1
Gene Ontology
ID GO:0047262
description probable galacturonosyltransferase-like 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000009_250 0.0 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
2 Hb_001976_100 0.0758745233 - - PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X2 [Jatropha curcas]
3 Hb_001709_080 0.0821262892 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
4 Hb_000368_040 0.0876904818 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
5 Hb_002171_050 0.0936687653 - - PREDICTED: leucine-rich repeat receptor-like protein kinase PEPR1 [Populus euphratica]
6 Hb_000080_100 0.0981137713 transcription factor TF Family: MYB PREDICTED: transcriptional activator Myb-like [Jatropha curcas]
7 Hb_002835_070 0.1000367945 - - conserved hypothetical protein [Ricinus communis]
8 Hb_004930_020 0.1035153711 transcription factor TF Family: MYB PREDICTED: transcriptional activator Myb-like [Jatropha curcas]
9 Hb_000012_380 0.1059451477 transcription factor TF Family: MYB-related conserved hypothetical protein [Ricinus communis]
10 Hb_000856_030 0.1060329553 - - ATP binding protein, putative [Ricinus communis]
11 Hb_000334_030 0.1060793269 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000245_110 0.10646588 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 12-like [Jatropha curcas]
13 Hb_042083_010 0.1125470834 - - PREDICTED: cellulose synthase A catalytic subunit 8 [UDP-forming] [Jatropha curcas]
14 Hb_005391_050 0.1198875218 - - PREDICTED: uncharacterized protein LOC105643654 [Jatropha curcas]
15 Hb_011224_150 0.1226461825 - - PREDICTED: E3 ubiquitin-protein ligase At4g11680 isoform X2 [Jatropha curcas]
16 Hb_000864_050 0.1242763569 - - zinc finger protein, putative [Ricinus communis]
17 Hb_002499_030 0.1248326932 - - receptor-kinase, putative [Ricinus communis]
18 Hb_001131_050 0.1251973171 - - hypothetical protein EUGRSUZ_C02968 [Eucalyptus grandis]
19 Hb_000023_180 0.1262177919 - - Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis]
20 Hb_001279_400 0.1262740319 - - PREDICTED: uncharacterized protein LOC105633544 [Jatropha curcas]

Gene co-expression network

sample Hb_000009_250 Hb_000009_250 Hb_001976_100 Hb_001976_100 Hb_000009_250--Hb_001976_100 Hb_001709_080 Hb_001709_080 Hb_000009_250--Hb_001709_080 Hb_000368_040 Hb_000368_040 Hb_000009_250--Hb_000368_040 Hb_002171_050 Hb_002171_050 Hb_000009_250--Hb_002171_050 Hb_000080_100 Hb_000080_100 Hb_000009_250--Hb_000080_100 Hb_002835_070 Hb_002835_070 Hb_000009_250--Hb_002835_070 Hb_004930_020 Hb_004930_020 Hb_001976_100--Hb_004930_020 Hb_000023_180 Hb_000023_180 Hb_001976_100--Hb_000023_180 Hb_001976_100--Hb_002835_070 Hb_001396_130 Hb_001396_130 Hb_001976_100--Hb_001396_130 Hb_000334_030 Hb_000334_030 Hb_001976_100--Hb_000334_030 Hb_042083_010 Hb_042083_010 Hb_001709_080--Hb_042083_010 Hb_000245_110 Hb_000245_110 Hb_001709_080--Hb_000245_110 Hb_000012_380 Hb_000012_380 Hb_001709_080--Hb_000012_380 Hb_001709_080--Hb_000368_040 Hb_005827_020 Hb_005827_020 Hb_001709_080--Hb_005827_020 Hb_000856_030 Hb_000856_030 Hb_000368_040--Hb_000856_030 Hb_001680_050 Hb_001680_050 Hb_000368_040--Hb_001680_050 Hb_005183_070 Hb_005183_070 Hb_000368_040--Hb_005183_070 Hb_029665_010 Hb_029665_010 Hb_000368_040--Hb_029665_010 Hb_000317_170 Hb_000317_170 Hb_000368_040--Hb_000317_170 Hb_000449_070 Hb_000449_070 Hb_002171_050--Hb_000449_070 Hb_004625_020 Hb_004625_020 Hb_002171_050--Hb_004625_020 Hb_004917_020 Hb_004917_020 Hb_002171_050--Hb_004917_020 Hb_005614_020 Hb_005614_020 Hb_002171_050--Hb_005614_020 Hb_133492_010 Hb_133492_010 Hb_002171_050--Hb_133492_010 Hb_002499_030 Hb_002499_030 Hb_002171_050--Hb_002499_030 Hb_011224_150 Hb_011224_150 Hb_000080_100--Hb_011224_150 Hb_000080_100--Hb_001976_100 Hb_000080_100--Hb_002171_050 Hb_000080_100--Hb_004930_020 Hb_001019_030 Hb_001019_030 Hb_000080_100--Hb_001019_030 Hb_002973_050 Hb_002973_050 Hb_002835_070--Hb_002973_050 Hb_002835_070--Hb_000023_180 Hb_133974_010 Hb_133974_010 Hb_002835_070--Hb_133974_010 Hb_002835_070--Hb_004917_020 Hb_182869_010 Hb_182869_010 Hb_002835_070--Hb_182869_010 Hb_000000_290 Hb_000000_290 Hb_002835_070--Hb_000000_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.073447 6.21604 1.68024 37.9937 0 0.109982
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0377874 0 1.98867 22.1753

CAGE analysis