Hb_000009_570

Information

Type -
Description -
Location Contig9: 568137-579578
Sequence    

Annotation

kegg
ID rcu:RCOM_0603590
description cytochrome P450, putative (EC:1.14.13.21)
nr
ID XP_011039260.1
description PREDICTED: cytochrome P450 CYP82D47-like [Populus euphratica]
swissprot
ID O49394
description Cytochrome P450 82C2 OS=Arabidopsis thaliana GN=CYP82C2 PE=2 SV=2
trembl
ID B9S8Q1
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0603590 PE=3 SV=1
Gene Ontology
ID GO:0005634
description cytochrome p450

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000009_570 0.0 - - PREDICTED: cytochrome P450 CYP82D47-like [Populus euphratica]
2 Hb_000011_230 0.0967323625 - - PREDICTED: bifunctional protein FolD 4, chloroplastic-like [Jatropha curcas]
3 Hb_004954_070 0.0988721538 - - PREDICTED: uncharacterized protein LOC105645187 [Jatropha curcas]
4 Hb_000575_120 0.1040120035 - - hypothetical protein POPTR_0011s02060g [Populus trichocarpa]
5 Hb_000453_060 0.1053868341 - - PREDICTED: pentatricopeptide repeat-containing protein At4g11690 [Jatropha curcas]
6 Hb_000296_070 0.106366737 - - hypothetical protein B456_003G048700 [Gossypium raimondii]
7 Hb_004602_040 0.1125497084 - - PREDICTED: leukocyte receptor cluster member 8 homolog isoform X1 [Jatropha curcas]
8 Hb_007254_070 0.1138433143 - - PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform X1 [Jatropha curcas]
9 Hb_001190_070 0.1153440234 - - PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-A [Jatropha curcas]
10 Hb_000015_060 0.1154288625 - - PREDICTED: uncharacterized protein LOC104239844 isoform X2 [Nicotiana sylvestris]
11 Hb_001912_100 0.1178335718 - - PREDICTED: uncharacterized protein LOC105636609 [Jatropha curcas]
12 Hb_027472_050 0.1178525182 transcription factor TF Family: NF-YC PREDICTED: nuclear transcription factor Y subunit C-2 [Jatropha curcas]
13 Hb_120327_010 0.118836886 - - PREDICTED: uncharacterized protein LOC105650959 [Jatropha curcas]
14 Hb_005271_190 0.1194590687 - - dead box ATP-dependent RNA helicase, putative [Ricinus communis]
15 Hb_000130_040 0.1207036289 - - PREDICTED: dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [Jatropha curcas]
16 Hb_002641_030 0.1213774728 - - PREDICTED: flowering time control protein FCA isoform X1 [Jatropha curcas]
17 Hb_001178_070 0.122518746 - - PREDICTED: BTB/POZ domain-containing protein FBL11 [Jatropha curcas]
18 Hb_000343_120 0.1235153726 - - PREDICTED: pentatricopeptide repeat-containing protein At3g16010 [Jatropha curcas]
19 Hb_003058_060 0.1236866817 - - PREDICTED: proteasome-associated protein ECM29 homolog [Jatropha curcas]
20 Hb_004235_080 0.1245152735 - - PREDICTED: coiled-coil domain-containing protein SCD2 [Jatropha curcas]

Gene co-expression network

sample Hb_000009_570 Hb_000009_570 Hb_000011_230 Hb_000011_230 Hb_000009_570--Hb_000011_230 Hb_004954_070 Hb_004954_070 Hb_000009_570--Hb_004954_070 Hb_000575_120 Hb_000575_120 Hb_000009_570--Hb_000575_120 Hb_000453_060 Hb_000453_060 Hb_000009_570--Hb_000453_060 Hb_000296_070 Hb_000296_070 Hb_000009_570--Hb_000296_070 Hb_004602_040 Hb_004602_040 Hb_000009_570--Hb_004602_040 Hb_000190_120 Hb_000190_120 Hb_000011_230--Hb_000190_120 Hb_009486_180 Hb_009486_180 Hb_000011_230--Hb_009486_180 Hb_000011_230--Hb_004954_070 Hb_009175_020 Hb_009175_020 Hb_000011_230--Hb_009175_020 Hb_004412_010 Hb_004412_010 Hb_000011_230--Hb_004412_010 Hb_000084_120 Hb_000084_120 Hb_000011_230--Hb_000084_120 Hb_007575_050 Hb_007575_050 Hb_004954_070--Hb_007575_050 Hb_017862_020 Hb_017862_020 Hb_004954_070--Hb_017862_020 Hb_004410_030 Hb_004410_030 Hb_004954_070--Hb_004410_030 Hb_000225_040 Hb_000225_040 Hb_004954_070--Hb_000225_040 Hb_031284_040 Hb_031284_040 Hb_004954_070--Hb_031284_040 Hb_000015_060 Hb_000015_060 Hb_000575_120--Hb_000015_060 Hb_003058_060 Hb_003058_060 Hb_000575_120--Hb_003058_060 Hb_000575_120--Hb_000453_060 Hb_000012_260 Hb_000012_260 Hb_000575_120--Hb_000012_260 Hb_002110_030 Hb_002110_030 Hb_000575_120--Hb_002110_030 Hb_000291_090 Hb_000291_090 Hb_000453_060--Hb_000291_090 Hb_000170_150 Hb_000170_150 Hb_000453_060--Hb_000170_150 Hb_000166_130 Hb_000166_130 Hb_000453_060--Hb_000166_130 Hb_013399_070 Hb_013399_070 Hb_000453_060--Hb_013399_070 Hb_000453_060--Hb_003058_060 Hb_000656_380 Hb_000656_380 Hb_000453_060--Hb_000656_380 Hb_000252_170 Hb_000252_170 Hb_000296_070--Hb_000252_170 Hb_007254_070 Hb_007254_070 Hb_000296_070--Hb_007254_070 Hb_002903_060 Hb_002903_060 Hb_000296_070--Hb_002903_060 Hb_000123_210 Hb_000123_210 Hb_000296_070--Hb_000123_210 Hb_000907_110 Hb_000907_110 Hb_000296_070--Hb_000907_110 Hb_120327_010 Hb_120327_010 Hb_000296_070--Hb_120327_010 Hb_001912_100 Hb_001912_100 Hb_004602_040--Hb_001912_100 Hb_004602_040--Hb_000084_120 Hb_000244_220 Hb_000244_220 Hb_004602_040--Hb_000244_220 Hb_000101_240 Hb_000101_240 Hb_004602_040--Hb_000101_240 Hb_000035_290 Hb_000035_290 Hb_004602_040--Hb_000035_290 Hb_123352_020 Hb_123352_020 Hb_004602_040--Hb_123352_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.696102 1.75325 0.547278 0.43837 1.54607 1.7893
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.984648 1.49241 0.800758 1.78637 0.847404

CAGE analysis