Hb_000009_590

Information

Type -
Description -
Location Contig9: 592742-598509
Sequence    

Annotation

kegg
ID rcu:RCOM_0603300
description oligopeptidase B, putative (EC:3.4.21.83)
nr
ID XP_012079140.1
description PREDICTED: prolyl endopeptidase-like isoform X1 [Jatropha curcas]
swissprot
ID P24555
description Protease 2 OS=Escherichia coli (strain K12) GN=ptrB PE=1 SV=2
trembl
ID B9S8P2
description Oligopeptidase B, putative OS=Ricinus communis GN=RCOM_0603300 PE=4 SV=1
Gene Ontology
ID GO:0016020
description prolyl endopeptidase-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61934: 595863-596180
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000009_590 0.0 - - PREDICTED: prolyl endopeptidase-like isoform X1 [Jatropha curcas]
2 Hb_003073_200 0.1085649709 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 [Jatropha curcas]
3 Hb_000041_220 0.1090934278 - - polyribonucleotide nucleotidyltransferase, putative [Ricinus communis]
4 Hb_006816_320 0.1166750914 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 16-like [Jatropha curcas]
5 Hb_000236_300 0.1184132978 - - PREDICTED: RNA-binding protein pno1-like [Jatropha curcas]
6 Hb_002505_040 0.1191758345 - - -
7 Hb_000398_190 0.1220818822 - - PREDICTED: outer envelope protein 64, mitochondrial [Jatropha curcas]
8 Hb_011612_010 0.1240753037 - - PREDICTED: zinc finger CCCH domain-containing protein 48-like [Jatropha curcas]
9 Hb_001514_200 0.1241288378 - - PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Jatropha curcas]
10 Hb_001975_070 0.1291520346 - - eukaryotic translation elongation factor 1B alpha-subunit [Hevea brasiliensis]
11 Hb_000002_330 0.1294435241 - - PREDICTED: actin-related protein 9 [Jatropha curcas]
12 Hb_005625_040 0.1308140523 - - snf1-kinase beta subunit, plants, putative [Ricinus communis]
13 Hb_000236_370 0.1314336289 - - PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1 [Jatropha curcas]
14 Hb_012193_010 0.1315453575 - - nucleic acid binding protein, putative [Ricinus communis]
15 Hb_001829_010 0.1329833154 - - PREDICTED: general transcription factor 3C polypeptide 3-like isoform X2 [Jatropha curcas]
16 Hb_002701_080 0.1330014725 - - PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Jatropha curcas]
17 Hb_003605_070 0.1337194511 - - PREDICTED: angio-associated migratory cell protein [Jatropha curcas]
18 Hb_000001_180 0.1357022988 - - PREDICTED: uncharacterized protein LOC105648978 [Jatropha curcas]
19 Hb_012654_010 0.1364554433 transcription factor TF Family: MYB-related PREDICTED: uncharacterized protein LOC105629849 [Jatropha curcas]
20 Hb_000645_150 0.1369637076 - - zinc finger protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000009_590 Hb_000009_590 Hb_003073_200 Hb_003073_200 Hb_000009_590--Hb_003073_200 Hb_000041_220 Hb_000041_220 Hb_000009_590--Hb_000041_220 Hb_006816_320 Hb_006816_320 Hb_000009_590--Hb_006816_320 Hb_000236_300 Hb_000236_300 Hb_000009_590--Hb_000236_300 Hb_002505_040 Hb_002505_040 Hb_000009_590--Hb_002505_040 Hb_000398_190 Hb_000398_190 Hb_000009_590--Hb_000398_190 Hb_000645_150 Hb_000645_150 Hb_003073_200--Hb_000645_150 Hb_007803_010 Hb_007803_010 Hb_003073_200--Hb_007803_010 Hb_000002_330 Hb_000002_330 Hb_003073_200--Hb_000002_330 Hb_000236_370 Hb_000236_370 Hb_003073_200--Hb_000236_370 Hb_000421_120 Hb_000421_120 Hb_003073_200--Hb_000421_120 Hb_000041_220--Hb_006816_320 Hb_002046_040 Hb_002046_040 Hb_000041_220--Hb_002046_040 Hb_000041_220--Hb_000398_190 Hb_000284_210 Hb_000284_210 Hb_000041_220--Hb_000284_210 Hb_000041_220--Hb_000236_370 Hb_009620_040 Hb_009620_040 Hb_000041_220--Hb_009620_040 Hb_006816_320--Hb_000236_370 Hb_012670_140 Hb_012670_140 Hb_006816_320--Hb_012670_140 Hb_000684_420 Hb_000684_420 Hb_006816_320--Hb_000684_420 Hb_000076_080 Hb_000076_080 Hb_006816_320--Hb_000076_080 Hb_000803_150 Hb_000803_150 Hb_006816_320--Hb_000803_150 Hb_000209_090 Hb_000209_090 Hb_000236_300--Hb_000209_090 Hb_175612_010 Hb_175612_010 Hb_000236_300--Hb_175612_010 Hb_004204_200 Hb_004204_200 Hb_000236_300--Hb_004204_200 Hb_007534_040 Hb_007534_040 Hb_000236_300--Hb_007534_040 Hb_005735_030 Hb_005735_030 Hb_000236_300--Hb_005735_030 Hb_001754_170 Hb_001754_170 Hb_000236_300--Hb_001754_170 Hb_000059_040 Hb_000059_040 Hb_002505_040--Hb_000059_040 Hb_002073_040 Hb_002073_040 Hb_002505_040--Hb_002073_040 Hb_000008_330 Hb_000008_330 Hb_002505_040--Hb_000008_330 Hb_002505_040--Hb_007803_010 Hb_002505_040--Hb_003073_200 Hb_002701_080 Hb_002701_080 Hb_000398_190--Hb_002701_080 Hb_001504_160 Hb_001504_160 Hb_000398_190--Hb_001504_160 Hb_012654_010 Hb_012654_010 Hb_000398_190--Hb_012654_010 Hb_011612_010 Hb_011612_010 Hb_000398_190--Hb_011612_010 Hb_000230_330 Hb_000230_330 Hb_000398_190--Hb_000230_330
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.48672 2.42862 0.520364 0.575673 5.16341 5.54081
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.84888 3.42947 1.56801 1.90535 0.123159

CAGE analysis