Hb_000009_600

Information

Type -
Description -
Location Contig9: 600102-602933
Sequence    

Annotation

kegg
ID rcu:RCOM_0603310
description molybdopterin cofactor sulfurase, putative
nr
ID XP_012079142.1
description PREDICTED: uncharacterized protein LOC105639637 [Jatropha curcas]
swissprot
ID Q8LGM7
description Molybdenum cofactor sulfurase OS=Solanum lycopersicum GN=FLACCA PE=2 SV=1
trembl
ID A0A067K6X0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12313 PE=4 SV=1
Gene Ontology
ID GO:0016740
description molybdopterin cofactor

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61936: 599654-603587
cDNA
(Sanger)
(ID:Location)		 020_J21.ab1: 602862-603587 , 034_J16.ab1: 602904-603587

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000009_600 0.0 - - PREDICTED: uncharacterized protein LOC105639637 [Jatropha curcas]
2 Hb_009851_070 0.0672014772 - - PREDICTED: cyclin-dependent kinase E-1 [Jatropha curcas]
3 Hb_000796_040 0.071477499 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
4 Hb_002234_170 0.0740926579 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Jatropha curcas]
5 Hb_000853_210 0.0759189229 - - PREDICTED: uncharacterized protein LOC105642575 isoform X1 [Jatropha curcas]
6 Hb_009503_030 0.0793593261 - - protein dimerization, putative [Ricinus communis]
7 Hb_002235_300 0.0800631934 - - PREDICTED: pentatricopeptide repeat-containing protein At5g15280 isoform X1 [Jatropha curcas]
8 Hb_001213_050 0.0805675469 - - PREDICTED: uncharacterized protein LOC105646665 isoform X1 [Jatropha curcas]
9 Hb_000037_190 0.0829602614 - - PREDICTED: uncharacterized protein LOC105641500 [Jatropha curcas]
10 Hb_000796_030 0.0834178081 - - PREDICTED: pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like [Jatropha curcas]
11 Hb_000780_230 0.0864039301 transcription factor TF Family: WRKY WRKY protein [Hevea brasiliensis]
12 Hb_138596_010 0.0881803656 - - PREDICTED: BTB/POZ domain-containing protein At2g13690 [Jatropha curcas]
13 Hb_000514_060 0.0898122206 transcription factor TF Family: LUG PREDICTED: transcriptional corepressor LEUNIG isoform X1 [Jatropha curcas]
14 Hb_000684_250 0.0899226065 - - PREDICTED: uncharacterized protein LOC105642172 [Jatropha curcas]
15 Hb_000958_140 0.0914032585 - - PREDICTED: uncharacterized protein LOC105628714 [Jatropha curcas]
16 Hb_001550_060 0.0917971759 - - PREDICTED: serine/threonine-protein phosphatase BSL3 isoform X4 [Jatropha curcas]
17 Hb_015807_070 0.0918019317 - - PREDICTED: autophagy-related protein 18f [Jatropha curcas]
18 Hb_002843_120 0.091968465 - - PREDICTED: uncharacterized protein LOC105645113 isoform X1 [Jatropha curcas]
19 Hb_002232_030 0.0925113037 - - Pinin, putative [Ricinus communis]
20 Hb_012490_090 0.0931584466 - - PREDICTED: myosin-17 [Jatropha curcas]

Gene co-expression network

sample Hb_000009_600 Hb_000009_600 Hb_009851_070 Hb_009851_070 Hb_000009_600--Hb_009851_070 Hb_000796_040 Hb_000796_040 Hb_000009_600--Hb_000796_040 Hb_002234_170 Hb_002234_170 Hb_000009_600--Hb_002234_170 Hb_000853_210 Hb_000853_210 Hb_000009_600--Hb_000853_210 Hb_009503_030 Hb_009503_030 Hb_000009_600--Hb_009503_030 Hb_002235_300 Hb_002235_300 Hb_000009_600--Hb_002235_300 Hb_000796_030 Hb_000796_030 Hb_009851_070--Hb_000796_030 Hb_009851_070--Hb_002234_170 Hb_000174_220 Hb_000174_220 Hb_009851_070--Hb_000174_220 Hb_009851_070--Hb_009503_030 Hb_003785_040 Hb_003785_040 Hb_009851_070--Hb_003785_040 Hb_000796_040--Hb_000853_210 Hb_004228_010 Hb_004228_010 Hb_000796_040--Hb_004228_010 Hb_007416_160 Hb_007416_160 Hb_000796_040--Hb_007416_160 Hb_000796_040--Hb_009503_030 Hb_000116_500 Hb_000116_500 Hb_000796_040--Hb_000116_500 Hb_003494_020 Hb_003494_020 Hb_002234_170--Hb_003494_020 Hb_002783_040 Hb_002783_040 Hb_002234_170--Hb_002783_040 Hb_000049_260 Hb_000049_260 Hb_002234_170--Hb_000049_260 Hb_002798_070 Hb_002798_070 Hb_002234_170--Hb_002798_070 Hb_006649_050 Hb_006649_050 Hb_002234_170--Hb_006649_050 Hb_000574_400 Hb_000574_400 Hb_002234_170--Hb_000574_400 Hb_034432_030 Hb_034432_030 Hb_000853_210--Hb_034432_030 Hb_000853_210--Hb_004228_010 Hb_007904_030 Hb_007904_030 Hb_000853_210--Hb_007904_030 Hb_004306_080 Hb_004306_080 Hb_000853_210--Hb_004306_080 Hb_009503_030--Hb_000796_030 Hb_009503_030--Hb_003785_040 Hb_000574_440 Hb_000574_440 Hb_009503_030--Hb_000574_440 Hb_006420_040 Hb_006420_040 Hb_009503_030--Hb_006420_040 Hb_009545_100 Hb_009545_100 Hb_009503_030--Hb_009545_100 Hb_000502_050 Hb_000502_050 Hb_009503_030--Hb_000502_050 Hb_000977_120 Hb_000977_120 Hb_002235_300--Hb_000977_120 Hb_002615_090 Hb_002615_090 Hb_002235_300--Hb_002615_090 Hb_000684_250 Hb_000684_250 Hb_002235_300--Hb_000684_250 Hb_002253_080 Hb_002253_080 Hb_002235_300--Hb_002253_080 Hb_000025_320 Hb_000025_320 Hb_002235_300--Hb_000025_320 Hb_002267_140 Hb_002267_140 Hb_002235_300--Hb_002267_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
15.9841 17.9578 8.78848 11.0732 19.483 14.3043
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.43144 9.00439 20.853 9.04492 14.3734

CAGE analysis