Hb_000009_660

Information

Type -
Description -
Location Contig9: 647793-650394
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000009_660 0.0 - - -
2 Hb_004734_040 0.1376070422 - - eukaryotic translation initiation factor 5A isoform I [Hevea brasiliensis]
3 Hb_002447_080 0.1484453192 - - Angio-associated migratory cell protein, putative [Ricinus communis]
4 Hb_001369_250 0.1524051793 - - PREDICTED: uncharacterized protein LOC105646469 isoform X1 [Jatropha curcas]
5 Hb_003994_120 0.1544596489 - - PREDICTED: uncharacterized protein LOC105130433 isoform X1 [Populus euphratica]
6 Hb_000903_060 0.1548033531 - - PREDICTED: ras-related protein RABA5e [Jatropha curcas]
7 Hb_007423_050 0.1559800348 - - PREDICTED: cysteine-rich receptor-like protein kinase 3 [Jatropha curcas]
8 Hb_000665_140 0.1569806218 - - PREDICTED: protein MEMO1 [Jatropha curcas]
9 Hb_003531_070 0.1577561611 - - PREDICTED: probable 6-phosphogluconolactonase 4, chloroplastic [Jatropha curcas]
10 Hb_006637_070 0.1578227518 - - PREDICTED: pentatricopeptide repeat-containing protein At2g37230 [Jatropha curcas]
11 Hb_035273_010 0.1578907826 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105647563 [Jatropha curcas]
12 Hb_002471_290 0.158574821 - - PREDICTED: vacuolar fusion protein CCZ1 homolog isoform X1 [Jatropha curcas]
13 Hb_004453_080 0.1604526162 - - PREDICTED: acyl-protein thioesterase 2-like [Populus euphratica]
14 Hb_000329_760 0.1604785466 - - PREDICTED: probable mitochondrial import inner membrane translocase subunit TIM21 [Jatropha curcas]
15 Hb_000053_020 0.160715762 - - F-box and wd40 domain protein, putative [Ricinus communis]
16 Hb_001168_050 0.1610298924 - - hypothetical protein POPTR_0007s03190g [Populus trichocarpa]
17 Hb_000510_240 0.1610583433 desease resistance Gene Name: PRK ATP binding protein, putative [Ricinus communis]
18 Hb_001332_040 0.1635817964 - - PREDICTED: transcription initiation factor IIB [Fragaria vesca subsp. vesca]
19 Hb_005391_040 0.1652524778 - - PREDICTED: 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 [Jatropha curcas]
20 Hb_003678_020 0.1660879083 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000009_660 Hb_000009_660 Hb_004734_040 Hb_004734_040 Hb_000009_660--Hb_004734_040 Hb_002447_080 Hb_002447_080 Hb_000009_660--Hb_002447_080 Hb_001369_250 Hb_001369_250 Hb_000009_660--Hb_001369_250 Hb_003994_120 Hb_003994_120 Hb_000009_660--Hb_003994_120 Hb_000903_060 Hb_000903_060 Hb_000009_660--Hb_000903_060 Hb_007423_050 Hb_007423_050 Hb_000009_660--Hb_007423_050 Hb_005391_040 Hb_005391_040 Hb_004734_040--Hb_005391_040 Hb_004734_040--Hb_000903_060 Hb_001653_020 Hb_001653_020 Hb_004734_040--Hb_001653_020 Hb_007894_060 Hb_007894_060 Hb_004734_040--Hb_007894_060 Hb_001301_110 Hb_001301_110 Hb_004734_040--Hb_001301_110 Hb_000665_050 Hb_000665_050 Hb_004734_040--Hb_000665_050 Hb_003020_280 Hb_003020_280 Hb_002447_080--Hb_003020_280 Hb_005488_020 Hb_005488_020 Hb_002447_080--Hb_005488_020 Hb_000071_170 Hb_000071_170 Hb_002447_080--Hb_000071_170 Hb_002447_080--Hb_003994_120 Hb_005054_230 Hb_005054_230 Hb_002447_080--Hb_005054_230 Hb_004450_040 Hb_004450_040 Hb_002447_080--Hb_004450_040 Hb_002675_140 Hb_002675_140 Hb_001369_250--Hb_002675_140 Hb_010174_150 Hb_010174_150 Hb_001369_250--Hb_010174_150 Hb_000555_100 Hb_000555_100 Hb_001369_250--Hb_000555_100 Hb_010560_050 Hb_010560_050 Hb_001369_250--Hb_010560_050 Hb_002357_060 Hb_002357_060 Hb_001369_250--Hb_002357_060 Hb_001369_250--Hb_000665_050 Hb_006637_070 Hb_006637_070 Hb_003994_120--Hb_006637_070 Hb_004586_420 Hb_004586_420 Hb_003994_120--Hb_004586_420 Hb_023001_040 Hb_023001_040 Hb_003994_120--Hb_023001_040 Hb_005914_170 Hb_005914_170 Hb_003994_120--Hb_005914_170 Hb_003058_120 Hb_003058_120 Hb_003994_120--Hb_003058_120 Hb_006452_100 Hb_006452_100 Hb_003994_120--Hb_006452_100 Hb_023732_030 Hb_023732_030 Hb_000903_060--Hb_023732_030 Hb_073973_100 Hb_073973_100 Hb_000903_060--Hb_073973_100 Hb_001018_050 Hb_001018_050 Hb_000903_060--Hb_001018_050 Hb_002197_050 Hb_002197_050 Hb_000903_060--Hb_002197_050 Hb_000556_120 Hb_000556_120 Hb_000903_060--Hb_000556_120 Hb_025336_020 Hb_025336_020 Hb_007423_050--Hb_025336_020 Hb_000008_420 Hb_000008_420 Hb_007423_050--Hb_000008_420 Hb_011671_270 Hb_011671_270 Hb_007423_050--Hb_011671_270 Hb_007423_050--Hb_006637_070 Hb_000690_150 Hb_000690_150 Hb_007423_050--Hb_000690_150 Hb_000088_270 Hb_000088_270 Hb_007423_050--Hb_000088_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.675374 0.360793 0.423772 0.468809 0.280472 0.168235
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.27171 0.76458 0.422381 1.28915 0.702631

CAGE analysis