Hb_000010_190

Information

Type -
Description -
Location Contig10: 226434-229890
Sequence    

Annotation

kegg
ID rcu:RCOM_1508020
description protein-l-isoaspartate O-methyltransferase, putative (EC:2.1.1.77)
nr
ID XP_012079946.1
description PREDICTED: protein-L-isoaspartate O-methyltransferase 1 isoform X2 [Jatropha curcas]
swissprot
ID Q42539
description Protein-L-isoaspartate O-methyltransferase 1 OS=Arabidopsis thaliana GN=PIMT1 PE=1 SV=3
trembl
ID A0A067KFG1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11381 PE=4 SV=1
Gene Ontology
ID GO:0005829
description protein-l-isoaspartate o-methyltransferase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_00151: 226393-229614 , PASA_asmbl_00153: 227174-229568
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000010_190 0.0 - - PREDICTED: protein-L-isoaspartate O-methyltransferase 1 isoform X2 [Jatropha curcas]
2 Hb_000336_150 0.072519278 - - ribulose-5-phosphate-3-epimerase, putative [Ricinus communis]
3 Hb_001470_030 0.0768467272 - - PREDICTED: MORC family CW-type zinc finger protein 3 isoform X2 [Jatropha curcas]
4 Hb_006153_110 0.079873877 - - dimethylaniline monooxygenase, putative [Ricinus communis]
5 Hb_001723_020 0.0819782583 - - PREDICTED: nuclear export mediator factor Nemf [Jatropha curcas]
6 Hb_004324_090 0.0822806836 - - PREDICTED: uncharacterized protein LOC105648352 isoform X1 [Jatropha curcas]
7 Hb_006478_040 0.0833526481 - - PREDICTED: methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial [Jatropha curcas]
8 Hb_000729_030 0.0863974126 - - PREDICTED: dentin sialophosphoprotein [Jatropha curcas]
9 Hb_006570_080 0.0870546775 - - PREDICTED: BRCA1-A complex subunit BRE isoform X1 [Jatropha curcas]
10 Hb_000069_380 0.0889887877 transcription factor TF Family: PHD PREDICTED: histone-lysine N-methyltransferase ATX3 isoform X2 [Jatropha curcas]
11 Hb_001030_020 0.0891374732 - - Poly(A) polymerase alpha, putative [Ricinus communis]
12 Hb_001359_050 0.0894303371 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001862_210 0.0894933248 - - PREDICTED: LOW QUALITY PROTEIN: salutaridine reductase-like [Citrus sinensis]
14 Hb_005116_060 0.0901526633 - - PREDICTED: mitochondrial Rho GTPase 2 isoform X1 [Jatropha curcas]
15 Hb_019280_050 0.0905063439 - - PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 [Jatropha curcas]
16 Hb_000460_030 0.0906780801 - - 4-hydroxybenzoate octaprenyltransferase, putative [Ricinus communis]
17 Hb_000340_400 0.0912757579 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]
18 Hb_002027_350 0.0920147029 - - PREDICTED: U1 small nuclear ribonucleoprotein C-like [Jatropha curcas]
19 Hb_003465_030 0.0920292275 - - conserved hypothetical protein [Ricinus communis]
20 Hb_010368_010 0.0945439676 - - RNA splicing protein mrs2, mitochondrial, putative [Ricinus communis]

Gene co-expression network

sample Hb_000010_190 Hb_000010_190 Hb_000336_150 Hb_000336_150 Hb_000010_190--Hb_000336_150 Hb_001470_030 Hb_001470_030 Hb_000010_190--Hb_001470_030 Hb_006153_110 Hb_006153_110 Hb_000010_190--Hb_006153_110 Hb_001723_020 Hb_001723_020 Hb_000010_190--Hb_001723_020 Hb_004324_090 Hb_004324_090 Hb_000010_190--Hb_004324_090 Hb_006478_040 Hb_006478_040 Hb_000010_190--Hb_006478_040 Hb_000729_030 Hb_000729_030 Hb_000336_150--Hb_000729_030 Hb_007304_120 Hb_007304_120 Hb_000336_150--Hb_007304_120 Hb_006615_240 Hb_006615_240 Hb_000336_150--Hb_006615_240 Hb_003582_060 Hb_003582_060 Hb_000336_150--Hb_003582_060 Hb_000205_090 Hb_000205_090 Hb_000336_150--Hb_000205_090 Hb_004109_170 Hb_004109_170 Hb_000336_150--Hb_004109_170 Hb_001030_020 Hb_001030_020 Hb_001470_030--Hb_001030_020 Hb_002078_350 Hb_002078_350 Hb_001470_030--Hb_002078_350 Hb_003938_090 Hb_003938_090 Hb_001470_030--Hb_003938_090 Hb_010423_030 Hb_010423_030 Hb_001470_030--Hb_010423_030 Hb_000152_500 Hb_000152_500 Hb_001470_030--Hb_000152_500 Hb_000373_070 Hb_000373_070 Hb_001470_030--Hb_000373_070 Hb_000331_470 Hb_000331_470 Hb_006153_110--Hb_000331_470 Hb_000217_030 Hb_000217_030 Hb_006153_110--Hb_000217_030 Hb_010098_050 Hb_010098_050 Hb_006153_110--Hb_010098_050 Hb_007304_090 Hb_007304_090 Hb_006153_110--Hb_007304_090 Hb_011512_070 Hb_011512_070 Hb_006153_110--Hb_011512_070 Hb_007765_110 Hb_007765_110 Hb_001723_020--Hb_007765_110 Hb_000340_400 Hb_000340_400 Hb_001723_020--Hb_000340_400 Hb_001862_210 Hb_001862_210 Hb_001723_020--Hb_001862_210 Hb_007035_050 Hb_007035_050 Hb_001723_020--Hb_007035_050 Hb_003464_090 Hb_003464_090 Hb_001723_020--Hb_003464_090 Hb_002890_290 Hb_002890_290 Hb_001723_020--Hb_002890_290 Hb_158445_010 Hb_158445_010 Hb_004324_090--Hb_158445_010 Hb_000310_020 Hb_000310_020 Hb_004324_090--Hb_000310_020 Hb_163256_020 Hb_163256_020 Hb_004324_090--Hb_163256_020 Hb_000069_420 Hb_000069_420 Hb_004324_090--Hb_000069_420 Hb_004324_090--Hb_006615_240 Hb_000856_010 Hb_000856_010 Hb_004324_090--Hb_000856_010 Hb_006478_040--Hb_000340_400 Hb_001546_080 Hb_001546_080 Hb_006478_040--Hb_001546_080 Hb_003030_060 Hb_003030_060 Hb_006478_040--Hb_003030_060 Hb_000318_250 Hb_000318_250 Hb_006478_040--Hb_000318_250 Hb_005116_060 Hb_005116_060 Hb_006478_040--Hb_005116_060 Hb_006478_040--Hb_001470_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
40.2357 58.6019 46.055 36.3291 39.1511 25.9402
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
71.264 75.5991 45.6038 50.0196 46.8494

CAGE analysis