Hb_000010_220

Information

Type -
Description -
Location Contig10: 241922-242140
Sequence    

Annotation

kegg
ID pop:POPTR_0012s09250g
description POPTRDRAFT_570182; hypothetical protein
nr
ID XP_012079941.1
description PREDICTED: uncharacterized protein LOC105640277 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K4E5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11378 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000010_220 0.0 - - PREDICTED: uncharacterized protein LOC105640277 [Jatropha curcas]
2 Hb_076771_010 0.1166840516 - - PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
3 Hb_001663_090 0.1184806691 - - ribonuclease t2, putative [Ricinus communis]
4 Hb_004324_100 0.1232016202 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
5 Hb_002739_160 0.1240315293 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
6 Hb_002597_030 0.1254397945 - - -
7 Hb_170632_010 0.1272588643 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
8 Hb_002676_110 0.1292125325 - - PREDICTED: xyloglucan endotransglucosylase/hydrolase 2-like [Gossypium raimondii]
9 Hb_030827_080 0.1308948264 - - PREDICTED: uncharacterized protein LOC105648491 [Jatropha curcas]
10 Hb_036029_020 0.1316459467 - - PREDICTED: patellin-3-like [Jatropha curcas]
11 Hb_029622_090 0.1341735033 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 2-like [Jatropha curcas]
12 Hb_077694_020 0.1359776399 - - SAUR family protein [Theobroma cacao]
13 Hb_000139_050 0.1367537528 - - PREDICTED: uncharacterized protein LOC105631970 [Jatropha curcas]
14 Hb_000060_080 0.1395045011 transcription factor TF Family: BES1 BRASSINAZOLE-RESISTANT 2 protein, putative [Ricinus communis]
15 Hb_153180_010 0.1436636273 - - NBS-LRR disease resistance protein NBS49 [Dimocarpus longan]
16 Hb_001198_180 0.1469148259 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
17 Hb_010642_010 0.1473058722 - - PREDICTED: aquaporin TIP2-1 [Jatropha curcas]
18 Hb_002048_070 0.1473860542 - - hypothetical protein JCGZ_15146 [Jatropha curcas]
19 Hb_029576_070 0.1473989379 - - Mitogen-activated protein kinase kinase kinase, putative [Ricinus communis]
20 Hb_017549_010 0.1488434013 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_00222 [Jatropha curcas]

Gene co-expression network

sample Hb_000010_220 Hb_000010_220 Hb_076771_010 Hb_076771_010 Hb_000010_220--Hb_076771_010 Hb_001663_090 Hb_001663_090 Hb_000010_220--Hb_001663_090 Hb_004324_100 Hb_004324_100 Hb_000010_220--Hb_004324_100 Hb_002739_160 Hb_002739_160 Hb_000010_220--Hb_002739_160 Hb_002597_030 Hb_002597_030 Hb_000010_220--Hb_002597_030 Hb_170632_010 Hb_170632_010 Hb_000010_220--Hb_170632_010 Hb_002676_110 Hb_002676_110 Hb_076771_010--Hb_002676_110 Hb_002233_080 Hb_002233_080 Hb_076771_010--Hb_002233_080 Hb_076771_010--Hb_001663_090 Hb_029622_090 Hb_029622_090 Hb_076771_010--Hb_029622_090 Hb_010721_010 Hb_010721_010 Hb_076771_010--Hb_010721_010 Hb_001663_090--Hb_029622_090 Hb_001663_090--Hb_002676_110 Hb_000028_330 Hb_000028_330 Hb_001663_090--Hb_000028_330 Hb_001663_090--Hb_002739_160 Hb_000060_080 Hb_000060_080 Hb_001663_090--Hb_000060_080 Hb_030827_080 Hb_030827_080 Hb_001663_090--Hb_030827_080 Hb_004324_100--Hb_000028_330 Hb_004324_100--Hb_002739_160 Hb_004324_100--Hb_030827_080 Hb_006736_040 Hb_006736_040 Hb_004324_100--Hb_006736_040 Hb_004324_100--Hb_029622_090 Hb_003435_040 Hb_003435_040 Hb_004324_100--Hb_003435_040 Hb_002739_160--Hb_030827_080 Hb_153180_010 Hb_153180_010 Hb_002739_160--Hb_153180_010 Hb_010642_010 Hb_010642_010 Hb_002739_160--Hb_010642_010 Hb_008352_020 Hb_008352_020 Hb_002739_160--Hb_008352_020 Hb_001198_180 Hb_001198_180 Hb_002739_160--Hb_001198_180 Hb_029576_070 Hb_029576_070 Hb_002597_030--Hb_029576_070 Hb_017549_010 Hb_017549_010 Hb_002597_030--Hb_017549_010 Hb_001677_190 Hb_001677_190 Hb_002597_030--Hb_001677_190 Hb_000120_600 Hb_000120_600 Hb_002597_030--Hb_000120_600 Hb_001856_130 Hb_001856_130 Hb_002597_030--Hb_001856_130 Hb_036029_020 Hb_036029_020 Hb_002597_030--Hb_036029_020 Hb_170632_010--Hb_000060_080 Hb_000975_090 Hb_000975_090 Hb_170632_010--Hb_000975_090 Hb_170632_010--Hb_001198_180 Hb_038718_010 Hb_038718_010 Hb_170632_010--Hb_038718_010 Hb_170632_010--Hb_001663_090 Hb_170632_010--Hb_002676_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.855341 18.1366 17.8184 34.8905 0.489021 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.799268 0 3.75316 2.90712

CAGE analysis