Hb_000010_300

Information

Type transcription factor
Description TF Family: TAZ
Location Contig10: 337569-340542
Sequence    

Annotation

kegg
ID rcu:RCOM_1507810
description protein binding protein, putative
nr
ID XP_002511276.1
description protein binding protein, putative [Ricinus communis]
swissprot
ID Q9FMK7
description BTB/POZ and TAZ domain-containing protein 1 OS=Arabidopsis thaliana GN=BT1 PE=1 SV=1
trembl
ID B9RAQ1
description Protein binding protein, putative OS=Ricinus communis GN=RCOM_1507810 PE=4 SV=1
Gene Ontology
ID GO:0003712
description btb poz and taz domain-containing protein 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_00163: 339257-340362
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000010_300 0.0 transcription factor TF Family: TAZ protein binding protein, putative [Ricinus communis]
2 Hb_000320_260 0.1814961092 - - unnamed protein product [Vitis vinifera]
3 Hb_009571_010 0.1928367462 - - early-responsive to dehydration family protein [Populus trichocarpa]
4 Hb_004452_090 0.1951323789 - - hypothetical protein JCGZ_12231 [Jatropha curcas]
5 Hb_000086_670 0.2086532405 - - PREDICTED: probable DNA helicase MCM9 [Jatropha curcas]
6 Hb_006472_070 0.2105607239 - - PREDICTED: uncharacterized protein LOC104445137 [Eucalyptus grandis]
7 Hb_006289_020 0.21140115 - - PREDICTED: shugoshin-1 isoform X1 [Jatropha curcas]
8 Hb_004155_020 0.2128181233 transcription factor TF Family: MYB myb, putative [Ricinus communis]
9 Hb_143813_020 0.212974624 transcription factor TF Family: WRKY hypothetical protein POPTR_0006s10950g [Populus trichocarpa]
10 Hb_007904_250 0.2134068646 - - PREDICTED: vignain-like [Jatropha curcas]
11 Hb_000526_010 0.2165117908 - - PREDICTED: uroporphyrinogen-III C-methyltransferase [Jatropha curcas]
12 Hb_011828_040 0.2182614176 - - PREDICTED: uncharacterized protein LOC105642173 isoform X2 [Jatropha curcas]
13 Hb_004193_010 0.2226543901 - - PREDICTED: uncharacterized protein LOC105650669 [Jatropha curcas]
14 Hb_006951_030 0.2233331611 - - PREDICTED: protein MCM10 homolog [Jatropha curcas]
15 Hb_083940_010 0.2243665418 - - Zeamatin precursor, putative [Ricinus communis]
16 Hb_012092_100 0.2253487311 - - conserved hypothetical protein [Ricinus communis]
17 Hb_002662_040 0.2314574442 - - PREDICTED: uncharacterized protein LOC105630915 [Jatropha curcas]
18 Hb_000925_040 0.2320394317 - - kinase, putative [Ricinus communis]
19 Hb_004163_030 0.2345236625 - - PREDICTED: protein PHLOEM PROTEIN 2-LIKE A10 [Jatropha curcas]
20 Hb_008864_100 0.2364891376 - - PREDICTED: uncharacterized protein LOC105631832 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000010_300 Hb_000010_300 Hb_000320_260 Hb_000320_260 Hb_000010_300--Hb_000320_260 Hb_009571_010 Hb_009571_010 Hb_000010_300--Hb_009571_010 Hb_004452_090 Hb_004452_090 Hb_000010_300--Hb_004452_090 Hb_000086_670 Hb_000086_670 Hb_000010_300--Hb_000086_670 Hb_006472_070 Hb_006472_070 Hb_000010_300--Hb_006472_070 Hb_006289_020 Hb_006289_020 Hb_000010_300--Hb_006289_020 Hb_009541_010 Hb_009541_010 Hb_000320_260--Hb_009541_010 Hb_002662_040 Hb_002662_040 Hb_000320_260--Hb_002662_040 Hb_000526_010 Hb_000526_010 Hb_000320_260--Hb_000526_010 Hb_004163_030 Hb_004163_030 Hb_000320_260--Hb_004163_030 Hb_105328_010 Hb_105328_010 Hb_000320_260--Hb_105328_010 Hb_000883_170 Hb_000883_170 Hb_009571_010--Hb_000883_170 Hb_083940_010 Hb_083940_010 Hb_009571_010--Hb_083940_010 Hb_007919_020 Hb_007919_020 Hb_009571_010--Hb_007919_020 Hb_001946_220 Hb_001946_220 Hb_009571_010--Hb_001946_220 Hb_000368_030 Hb_000368_030 Hb_009571_010--Hb_000368_030 Hb_008173_060 Hb_008173_060 Hb_004452_090--Hb_008173_060 Hb_005701_110 Hb_005701_110 Hb_004452_090--Hb_005701_110 Hb_000236_480 Hb_000236_480 Hb_004452_090--Hb_000236_480 Hb_001155_050 Hb_001155_050 Hb_004452_090--Hb_001155_050 Hb_002217_190 Hb_002217_190 Hb_004452_090--Hb_002217_190 Hb_001040_060 Hb_001040_060 Hb_004452_090--Hb_001040_060 Hb_007002_040 Hb_007002_040 Hb_000086_670--Hb_007002_040 Hb_001080_050 Hb_001080_050 Hb_000086_670--Hb_001080_050 Hb_000960_090 Hb_000960_090 Hb_000086_670--Hb_000960_090 Hb_003784_040 Hb_003784_040 Hb_000086_670--Hb_003784_040 Hb_001780_080 Hb_001780_080 Hb_000086_670--Hb_001780_080 Hb_004193_010 Hb_004193_010 Hb_006472_070--Hb_004193_010 Hb_001016_140 Hb_001016_140 Hb_006472_070--Hb_001016_140 Hb_006472_080 Hb_006472_080 Hb_006472_070--Hb_006472_080 Hb_001085_150 Hb_001085_150 Hb_006472_070--Hb_001085_150 Hb_006472_070--Hb_000320_260 Hb_002965_160 Hb_002965_160 Hb_006289_020--Hb_002965_160 Hb_003878_060 Hb_003878_060 Hb_006289_020--Hb_003878_060 Hb_006289_020--Hb_000236_480 Hb_008725_070 Hb_008725_070 Hb_006289_020--Hb_008725_070 Hb_006289_020--Hb_000960_090 Hb_000288_090 Hb_000288_090 Hb_006289_020--Hb_000288_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.28167 4.37977 19.4831 10.4051 0.171762 0.634475
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.976596 1.63904 8.93695 4.95018 0.695435

CAGE analysis