Hb_000011_070

Information

Type -
Description -
Location Contig11: 173579-184362
Sequence    

Annotation

kegg
ID rcu:RCOM_0622480
description Xylem serine proteinase 1 precursor, putative (EC:1.3.1.74)
nr
ID XP_012068758.1
description PREDICTED: CO(2)-response secreted protease-like [Jatropha curcas]
swissprot
ID Q9LNU1
description CO(2)-response secreted protease OS=Arabidopsis thaliana GN=CRSP PE=2 SV=1
trembl
ID A0A067L7X2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24599 PE=4 SV=1
Gene Ontology
ID GO:0004252
description subtilisin-like protease

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000011_070 0.0 - - PREDICTED: CO(2)-response secreted protease-like [Jatropha curcas]
2 Hb_000349_200 0.1073516553 - - PREDICTED: probable sugar phosphate/phosphate translocator At1g12500 [Jatropha curcas]
3 Hb_000271_220 0.1172051893 - - PREDICTED: xylosyltransferase 2 [Jatropha curcas]
4 Hb_000603_020 0.131031168 - - PREDICTED: uncharacterized protein LOC105638063 isoform X1 [Jatropha curcas]
5 Hb_011828_010 0.1355814083 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720 [Jatropha curcas]
6 Hb_003929_230 0.1383995402 - - PREDICTED: S-adenosylmethionine synthase 5 [Nelumbo nucifera]
7 Hb_000071_160 0.147873171 - - PREDICTED: protein IQ-DOMAIN 14 [Jatropha curcas]
8 Hb_012807_150 0.1502816972 - - PREDICTED: alpha-L-fucosidase 1 [Jatropha curcas]
9 Hb_005941_030 0.155011803 transcription factor TF Family: HB DNA binding protein, putative [Ricinus communis]
10 Hb_000320_270 0.1553316373 - - PREDICTED: 5'-adenylylsulfate reductase 1, chloroplastic [Jatropha curcas]
11 Hb_000599_330 0.1556167307 - - hypothetical protein JCGZ_17661 [Jatropha curcas]
12 Hb_000424_030 0.1592082879 - - conserved hypothetical protein [Ricinus communis]
13 Hb_003912_080 0.1592272681 - - PREDICTED: LOW QUALITY PROTEIN: ultraviolet-B receptor UVR8 [Jatropha curcas]
14 Hb_001951_190 0.1593906232 - - PREDICTED: glucan endo-1,3-beta-glucosidase 3-like isoform X2 [Populus euphratica]
15 Hb_006570_090 0.1606792316 - - tubulin beta chain, putative [Ricinus communis]
16 Hb_000230_470 0.1607709826 - - PREDICTED: mitogen-activated protein kinase 15 isoform X2 [Jatropha curcas]
17 Hb_003102_030 0.1622080098 - - PREDICTED: uncharacterized protein LOC105644418 [Jatropha curcas]
18 Hb_000196_010 0.1627651854 - - Patellin-5, putative [Ricinus communis]
19 Hb_003006_090 0.1640952431 - - PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming] isoform X2 [Jatropha curcas]
20 Hb_005408_100 0.1644686468 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 14 [Jatropha curcas]

Gene co-expression network

sample Hb_000011_070 Hb_000011_070 Hb_000349_200 Hb_000349_200 Hb_000011_070--Hb_000349_200 Hb_000271_220 Hb_000271_220 Hb_000011_070--Hb_000271_220 Hb_000603_020 Hb_000603_020 Hb_000011_070--Hb_000603_020 Hb_011828_010 Hb_011828_010 Hb_000011_070--Hb_011828_010 Hb_003929_230 Hb_003929_230 Hb_000011_070--Hb_003929_230 Hb_000071_160 Hb_000071_160 Hb_000011_070--Hb_000071_160 Hb_000349_200--Hb_000271_220 Hb_000349_200--Hb_000603_020 Hb_000349_200--Hb_003929_230 Hb_003006_090 Hb_003006_090 Hb_000349_200--Hb_003006_090 Hb_000056_190 Hb_000056_190 Hb_000349_200--Hb_000056_190 Hb_000271_220--Hb_000603_020 Hb_012807_150 Hb_012807_150 Hb_000271_220--Hb_012807_150 Hb_000283_140 Hb_000283_140 Hb_000271_220--Hb_000283_140 Hb_000271_220--Hb_003006_090 Hb_003001_130 Hb_003001_130 Hb_000271_220--Hb_003001_130 Hb_000603_020--Hb_003001_130 Hb_000603_020--Hb_012807_150 Hb_000603_020--Hb_000283_140 Hb_000320_350 Hb_000320_350 Hb_000603_020--Hb_000320_350 Hb_000424_030 Hb_000424_030 Hb_000603_020--Hb_000424_030 Hb_000473_120 Hb_000473_120 Hb_011828_010--Hb_000473_120 Hb_000138_060 Hb_000138_060 Hb_011828_010--Hb_000138_060 Hb_002289_150 Hb_002289_150 Hb_011828_010--Hb_002289_150 Hb_001969_140 Hb_001969_140 Hb_011828_010--Hb_001969_140 Hb_116702_010 Hb_116702_010 Hb_011828_010--Hb_116702_010 Hb_011828_010--Hb_000271_220 Hb_003929_230--Hb_003001_130 Hb_001318_100 Hb_001318_100 Hb_003929_230--Hb_001318_100 Hb_005408_100 Hb_005408_100 Hb_003929_230--Hb_005408_100 Hb_000109_190 Hb_000109_190 Hb_003929_230--Hb_000109_190 Hb_003929_230--Hb_000603_020 Hb_005941_030 Hb_005941_030 Hb_000071_160--Hb_005941_030 Hb_014361_090 Hb_014361_090 Hb_000071_160--Hb_014361_090 Hb_000071_160--Hb_011828_010 Hb_000071_160--Hb_000271_220 Hb_004899_340 Hb_004899_340 Hb_000071_160--Hb_004899_340 Hb_003929_190 Hb_003929_190 Hb_000071_160--Hb_003929_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.406318 1.13682 1.25407 2.61263 0.0855979 0.380419
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.113001 0.0370541 0.114041 0.222958 1.30445

CAGE analysis