Hb_000011_170

Information

Type -
Description -
Location Contig11: 248719-254479
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa003973mg
description hypothetical protein
nr
ID XP_012069226.1
description PREDICTED: uncharacterized protein LOC105631661 [Jatropha curcas]
swissprot
ID P61872
description Lipase OS=Rhizopus oryzae PE=1 SV=1
trembl
ID A0A067KWS6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24611 PE=4 SV=1
Gene Ontology
ID GO:0016787
description lipase class 3 family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000011_170 0.0 - - PREDICTED: uncharacterized protein LOC105631661 [Jatropha curcas]
2 Hb_004453_030 0.3080723466 - - hypothetical protein POPTR_0006s26790g [Populus trichocarpa]
3 Hb_061390_010 0.315048038 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
4 Hb_008880_010 0.3150481275 - - PREDICTED: receptor-like serine/threonine-protein kinase SD1-8 isoform X2 [Nelumbo nucifera]
5 Hb_115350_010 0.3150506493 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
6 Hb_002779_020 0.3150526952 - - transcription factor, putative [Ricinus communis]
7 Hb_136696_010 0.3150580359 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
8 Hb_068804_160 0.3153846918 transcription factor TF Family: MIKC hypothetical protein JCGZ_12632 [Jatropha curcas]
9 Hb_004304_050 0.3376407208 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
10 Hb_005183_160 0.3391838011 - - -
11 Hb_003918_040 0.3414525847 - - -
12 Hb_001798_050 0.3611765524 transcription factor TF Family: NAC NAC transcription factor 057 [Jatropha curcas]
13 Hb_087999_010 0.3705888396 - - PREDICTED: uncharacterized protein LOC105640118 [Jatropha curcas]
14 Hb_000093_070 0.3705895896 transcription factor TF Family: C2C2-YABBY Protein CRABS CLAW, putative [Ricinus communis]
15 Hb_132840_040 0.3707131017 - - 1-aminocyclopropane-1-carboxylate oxidase, putative [Ricinus communis]
16 Hb_009078_040 0.3732877932 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
17 Hb_156850_010 0.3787511007 - - PREDICTED: uncharacterized protein LOC105635403 [Jatropha curcas]
18 Hb_159500_010 0.3895446281 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
19 Hb_004324_170 0.3919198048 - - -
20 Hb_007545_040 0.3941012612 - - PREDICTED: uncharacterized protein LOC104884077 [Beta vulgaris subsp. vulgaris]

Gene co-expression network

sample Hb_000011_170 Hb_000011_170 Hb_004453_030 Hb_004453_030 Hb_000011_170--Hb_004453_030 Hb_061390_010 Hb_061390_010 Hb_000011_170--Hb_061390_010 Hb_008880_010 Hb_008880_010 Hb_000011_170--Hb_008880_010 Hb_115350_010 Hb_115350_010 Hb_000011_170--Hb_115350_010 Hb_002779_020 Hb_002779_020 Hb_000011_170--Hb_002779_020 Hb_136696_010 Hb_136696_010 Hb_000011_170--Hb_136696_010 Hb_005736_040 Hb_005736_040 Hb_004453_030--Hb_005736_040 Hb_032202_030 Hb_032202_030 Hb_004453_030--Hb_032202_030 Hb_173902_040 Hb_173902_040 Hb_004453_030--Hb_173902_040 Hb_037964_010 Hb_037964_010 Hb_004453_030--Hb_037964_010 Hb_008507_050 Hb_008507_050 Hb_004453_030--Hb_008507_050 Hb_061390_010--Hb_008880_010 Hb_061390_010--Hb_115350_010 Hb_061390_010--Hb_002779_020 Hb_061390_010--Hb_136696_010 Hb_068804_160 Hb_068804_160 Hb_061390_010--Hb_068804_160 Hb_004304_050 Hb_004304_050 Hb_061390_010--Hb_004304_050 Hb_008880_010--Hb_115350_010 Hb_008880_010--Hb_002779_020 Hb_008880_010--Hb_136696_010 Hb_008880_010--Hb_068804_160 Hb_008880_010--Hb_004304_050 Hb_115350_010--Hb_002779_020 Hb_115350_010--Hb_136696_010 Hb_115350_010--Hb_068804_160 Hb_115350_010--Hb_004304_050 Hb_002779_020--Hb_136696_010 Hb_002779_020--Hb_068804_160 Hb_002779_020--Hb_004304_050 Hb_136696_010--Hb_068804_160 Hb_136696_010--Hb_004304_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.00977314 0 0.0131631 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0299201 0 0 0 0

CAGE analysis