Hb_000011_330

Information

Type -
Description -
Location Contig11: 354935-365048
Sequence    

Annotation

kegg
ID rcu:RCOM_0417950
description fyve finger-containing phosphoinositide kinase, fyv1, putative (EC:2.7.1.150)
nr
ID XP_002532951.1
description fyve finger-containing phosphoinositide kinase, fyv1, putative [Ricinus communis]
swissprot
ID Q9LUM0
description 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana GN=FAB1B PE=2 SV=1
trembl
ID B9T3Y2
description Fyve finger-containing phosphoinositide kinase, fyv1, putative OS=Ricinus communis GN=RCOM_0417950 PE=4 SV=1
Gene Ontology
ID GO:0005739
description 1-phosphatidylinositol-3-phosphate 5-kinase fab1b-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03007: 355067-357404 , PASA_asmbl_03008: 357553-359879 , PASA_asmbl_03009: 360191-360770 , PASA_asmbl_03011: 363451-364300
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000011_330 0.0 - - fyve finger-containing phosphoinositide kinase, fyv1, putative [Ricinus communis]
2 Hb_000567_380 0.0716522956 - - ubiquitin specific protease 39 and snrnp assembly factor, putative [Ricinus communis]
3 Hb_002205_190 0.0789772735 - - PREDICTED: U-box domain-containing protein 62-like [Jatropha curcas]
4 Hb_003976_030 0.0809777831 - - PREDICTED: probable phenylalanine--tRNA ligase beta subunit [Jatropha curcas]
5 Hb_000092_010 0.0955837265 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105646502 [Jatropha curcas]
6 Hb_000723_130 0.1020843739 desease resistance Gene Name: CDC48_N cell division cycle protein 48 [Hevea brasiliensis]
7 Hb_046198_010 0.1037452527 - - PREDICTED: NADPH-dependent pterin aldehyde reductase [Jatropha curcas]
8 Hb_000140_230 0.1072684758 - - PREDICTED: pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Jatropha curcas]
9 Hb_012325_020 0.1079199467 - - PREDICTED: ATPase family AAA domain-containing protein At1g05910 isoform X1 [Jatropha curcas]
10 Hb_002311_040 0.1086583981 - - hypothetical protein JCGZ_18966 [Jatropha curcas]
11 Hb_000723_200 0.1094047538 transcription factor TF Family: MYB-related PREDICTED: uncharacterized protein LOC105642236 isoform X1 [Jatropha curcas]
12 Hb_000442_080 0.1094184113 - - hypothetical protein JCGZ_03373 [Jatropha curcas]
13 Hb_010874_020 0.1099732699 - - PREDICTED: uncharacterized protein LOC105636745 [Jatropha curcas]
14 Hb_008695_140 0.1130872942 - - Vacuolar protein sorting-associated protein VPS9, putative [Ricinus communis]
15 Hb_168697_010 0.1131016271 - - hypothetical protein JCGZ_16772 [Jatropha curcas]
16 Hb_001617_050 0.1136765549 - - PREDICTED: uncharacterized protein LOC105649351 isoform X1 [Jatropha curcas]
17 Hb_002942_100 0.1147338041 - - PREDICTED: pentatricopeptide repeat-containing protein At5g61990, mitochondrial [Jatropha curcas]
18 Hb_000335_020 0.1161856499 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
19 Hb_002217_300 0.1163763091 - - PREDICTED: pentatricopeptide repeat-containing protein At3g48810 [Jatropha curcas]
20 Hb_002496_040 0.1172302834 - - PREDICTED: pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_000011_330 Hb_000011_330 Hb_000567_380 Hb_000567_380 Hb_000011_330--Hb_000567_380 Hb_002205_190 Hb_002205_190 Hb_000011_330--Hb_002205_190 Hb_003976_030 Hb_003976_030 Hb_000011_330--Hb_003976_030 Hb_000092_010 Hb_000092_010 Hb_000011_330--Hb_000092_010 Hb_000723_130 Hb_000723_130 Hb_000011_330--Hb_000723_130 Hb_046198_010 Hb_046198_010 Hb_000011_330--Hb_046198_010 Hb_000567_380--Hb_002205_190 Hb_008695_140 Hb_008695_140 Hb_000567_380--Hb_008695_140 Hb_000567_380--Hb_003976_030 Hb_012325_020 Hb_012325_020 Hb_000567_380--Hb_012325_020 Hb_050622_050 Hb_050622_050 Hb_000567_380--Hb_050622_050 Hb_004785_140 Hb_004785_140 Hb_002205_190--Hb_004785_140 Hb_002205_190--Hb_003976_030 Hb_002205_190--Hb_008695_140 Hb_002496_040 Hb_002496_040 Hb_002205_190--Hb_002496_040 Hb_003976_030--Hb_000092_010 Hb_003976_030--Hb_012325_020 Hb_000280_080 Hb_000280_080 Hb_003976_030--Hb_000280_080 Hb_005348_140 Hb_005348_140 Hb_003976_030--Hb_005348_140 Hb_001892_020 Hb_001892_020 Hb_003976_030--Hb_001892_020 Hb_000138_110 Hb_000138_110 Hb_000092_010--Hb_000138_110 Hb_007765_020 Hb_007765_020 Hb_000092_010--Hb_007765_020 Hb_000092_010--Hb_012325_020 Hb_000092_010--Hb_000723_130 Hb_000723_200 Hb_000723_200 Hb_000092_010--Hb_000723_200 Hb_002311_040 Hb_002311_040 Hb_000723_130--Hb_002311_040 Hb_006915_030 Hb_006915_030 Hb_000723_130--Hb_006915_030 Hb_000571_110 Hb_000571_110 Hb_000723_130--Hb_000571_110 Hb_009548_020 Hb_009548_020 Hb_000723_130--Hb_009548_020 Hb_002942_100 Hb_002942_100 Hb_000723_130--Hb_002942_100 Hb_000832_020 Hb_000832_020 Hb_000723_130--Hb_000832_020 Hb_000335_020 Hb_000335_020 Hb_046198_010--Hb_000335_020 Hb_001266_060 Hb_001266_060 Hb_046198_010--Hb_001266_060 Hb_046198_010--Hb_000567_380 Hb_000330_100 Hb_000330_100 Hb_046198_010--Hb_000330_100 Hb_000063_140 Hb_000063_140 Hb_046198_010--Hb_000063_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.48147 9.12161 4.81366 6.06717 8.55265 10.0146
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.42894 5.91015 23.9295 7.22867 5.79047

CAGE analysis