Hb_000011_380

Information

Type -
Description -
Location Contig11: 403163-405520
Sequence    

Annotation

kegg
ID pop:POPTR_0001s16390g
description subtilase family protein
nr
ID XP_012068804.1
description PREDICTED: LOW QUALITY PROTEIN: subtilisin-like protease SBT1.6 [Jatropha curcas]
swissprot
ID O49607
description Subtilisin-like protease SBT1.6 OS=Arabidopsis thaliana GN=SBT1.6 PE=2 SV=1
trembl
ID B9N7H6
description Subtilase family protein OS=Populus trichocarpa GN=POPTR_0001s16390g PE=4 SV=1
Gene Ontology
ID GO:0004252
description subtilisin-like protease

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03017: 403238-405744
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000011_380 0.0 - - PREDICTED: LOW QUALITY PROTEIN: subtilisin-like protease SBT1.6 [Jatropha curcas]
2 Hb_007161_020 0.1566453905 - - PREDICTED: serine/threonine-protein kinase BRI1-like 2 [Jatropha curcas]
3 Hb_039096_010 0.1622706523 - - unknown [Populus trichocarpa]
4 Hb_113945_010 0.1680492217 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
5 Hb_000749_160 0.1709554271 - - calmodulin binding protein, putative [Ricinus communis]
6 Hb_000429_030 0.1747181282 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
7 Hb_000106_060 0.1748542152 - - PREDICTED: uncharacterized protein LOC105636580 [Jatropha curcas]
8 Hb_001564_090 0.1826347046 - - conserved hypothetical protein [Ricinus communis]
9 Hb_170861_010 0.1842837555 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
10 Hb_003050_100 0.1865807853 - - PREDICTED: uncharacterized protein LOC105633987 [Jatropha curcas]
11 Hb_001663_120 0.1914910049 - - PREDICTED: formin-like protein 1 isoform X1 [Jatropha curcas]
12 Hb_002876_190 0.1920384607 transcription factor TF Family: GRAS hypothetical protein PRUPE_ppa017519mg [Prunus persica]
13 Hb_128582_010 0.1926509498 - - -
14 Hb_009615_030 0.1926946018 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
15 Hb_005333_120 0.1934178295 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2 [Jatropha curcas]
16 Hb_007138_030 0.1941555077 - - PREDICTED: putative disease resistance protein At4g11170 [Jatropha curcas]
17 Hb_000934_180 0.1950623738 - - hypothetical protein JCGZ_25237 [Jatropha curcas]
18 Hb_001775_130 0.1962167 - - Prephenate dehydratase [Hevea brasiliensis]
19 Hb_064122_010 0.1964152525 - - PREDICTED: uncharacterized protein LOC105631858 isoform X2 [Jatropha curcas]
20 Hb_029866_080 0.1972084049 - - PREDICTED: probable inactive receptor kinase At4g23740 [Jatropha curcas]

Gene co-expression network

sample Hb_000011_380 Hb_000011_380 Hb_007161_020 Hb_007161_020 Hb_000011_380--Hb_007161_020 Hb_039096_010 Hb_039096_010 Hb_000011_380--Hb_039096_010 Hb_113945_010 Hb_113945_010 Hb_000011_380--Hb_113945_010 Hb_000749_160 Hb_000749_160 Hb_000011_380--Hb_000749_160 Hb_000429_030 Hb_000429_030 Hb_000011_380--Hb_000429_030 Hb_000106_060 Hb_000106_060 Hb_000011_380--Hb_000106_060 Hb_007161_020--Hb_113945_010 Hb_170861_010 Hb_170861_010 Hb_007161_020--Hb_170861_010 Hb_007161_020--Hb_000106_060 Hb_007161_020--Hb_000429_030 Hb_007161_020--Hb_039096_010 Hb_080068_010 Hb_080068_010 Hb_007161_020--Hb_080068_010 Hb_002876_190 Hb_002876_190 Hb_039096_010--Hb_002876_190 Hb_001775_130 Hb_001775_130 Hb_039096_010--Hb_001775_130 Hb_039096_010--Hb_113945_010 Hb_039096_010--Hb_000106_060 Hb_000934_180 Hb_000934_180 Hb_039096_010--Hb_000934_180 Hb_039096_010--Hb_170861_010 Hb_113945_010--Hb_170861_010 Hb_113945_010--Hb_000106_060 Hb_113945_010--Hb_000934_180 Hb_113945_010--Hb_002876_190 Hb_009615_030 Hb_009615_030 Hb_000749_160--Hb_009615_030 Hb_003964_060 Hb_003964_060 Hb_000749_160--Hb_003964_060 Hb_000676_170 Hb_000676_170 Hb_000749_160--Hb_000676_170 Hb_008727_040 Hb_008727_040 Hb_000749_160--Hb_008727_040 Hb_005144_080 Hb_005144_080 Hb_000749_160--Hb_005144_080 Hb_002580_020 Hb_002580_020 Hb_000749_160--Hb_002580_020 Hb_003371_040 Hb_003371_040 Hb_000429_030--Hb_003371_040 Hb_003171_070 Hb_003171_070 Hb_000429_030--Hb_003171_070 Hb_081191_010 Hb_081191_010 Hb_000429_030--Hb_081191_010 Hb_000429_030--Hb_170861_010 Hb_000429_030--Hb_009615_030 Hb_000106_060--Hb_170861_010 Hb_000106_060--Hb_000934_180 Hb_000106_060--Hb_002876_190 Hb_000106_060--Hb_001775_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.79376 7.61042 7.08645 88.9499 4.04438 3.04184
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0941472 0.074082 2.25681 56.2194 8.27155

CAGE analysis