Hb_000011_560

Information

Type -
Description -
Location Contig11: 542658-550832
Sequence    

Annotation

kegg
ID pop:POPTR_0001s16420g
description hypothetical protein
nr
ID XP_012068819.1
description PREDICTED: phosphoinositide phosphatase SAC2 isoform X1 [Jatropha curcas]
swissprot
ID Q94A27
description Phosphoinositide phosphatase SAC2 OS=Arabidopsis thaliana GN=SAC2 PE=2 SV=1
trembl
ID A0A067KWR4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24650 PE=4 SV=1
Gene Ontology
ID GO:0042578
description phosphoinositide phosphatase sac2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03029: 542689-548726 , PASA_asmbl_03030: 542689-544894 , PASA_asmbl_03032: 548957-550225
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000011_560 0.0 - - PREDICTED: phosphoinositide phosphatase SAC2 isoform X1 [Jatropha curcas]
2 Hb_004545_120 0.097382702 - - PREDICTED: uncharacterized protein LOC105647604 [Jatropha curcas]
3 Hb_000310_060 0.1055372599 - - hypothetical protein JCGZ_20793 [Jatropha curcas]
4 Hb_001587_040 0.112911865 - - PREDICTED: soluble inorganic pyrophosphatase 6, chloroplastic [Jatropha curcas]
5 Hb_000327_200 0.1132166118 - - glutathione-s-transferase omega, putative [Ricinus communis]
6 Hb_005527_060 0.1177530413 - - malic enzyme, putative [Ricinus communis]
7 Hb_003664_030 0.1195169903 - - PREDICTED: mitochondrial carnitine/acylcarnitine carrier-like protein [Jatropha curcas]
8 Hb_002641_120 0.1225911611 - - PREDICTED: calmodulin [Jatropha curcas]
9 Hb_000940_030 0.1237326587 - - PREDICTED: triosephosphate isomerase, chloroplastic [Jatropha curcas]
10 Hb_000334_050 0.1256556726 - - PREDICTED: vesicle-associated protein 4-1-like [Jatropha curcas]
11 Hb_000270_280 0.1278031937 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
12 Hb_000307_070 0.1314141133 - - protein kinase, putative [Ricinus communis]
13 Hb_000996_080 0.1315315452 - - PREDICTED: intracellular protein transport protein USO1 [Jatropha curcas]
14 Hb_005784_030 0.132491153 - - PREDICTED: uncharacterized protein LOC105645162 isoform X2 [Jatropha curcas]
15 Hb_003398_040 0.1361431114 - - PREDICTED: actin-related protein 5 isoform X1 [Jatropha curcas]
16 Hb_011476_030 0.1377778467 - - PREDICTED: uncharacterized protein LOC105632352 [Jatropha curcas]
17 Hb_003020_250 0.1402965746 - - PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 2 [Jatropha curcas]
18 Hb_004440_070 0.1405967946 - - PREDICTED: pentatricopeptide repeat-containing protein At5g66520 [Jatropha curcas]
19 Hb_002701_070 0.1458687678 - - PREDICTED: uncharacterized protein LOC105646760 [Jatropha curcas]
20 Hb_000753_110 0.1472409264 transcription factor TF Family: bHLH PREDICTED: transcription factor BIM1 isoform X6 [Jatropha curcas]

Gene co-expression network

sample Hb_000011_560 Hb_000011_560 Hb_004545_120 Hb_004545_120 Hb_000011_560--Hb_004545_120 Hb_000310_060 Hb_000310_060 Hb_000011_560--Hb_000310_060 Hb_001587_040 Hb_001587_040 Hb_000011_560--Hb_001587_040 Hb_000327_200 Hb_000327_200 Hb_000011_560--Hb_000327_200 Hb_005527_060 Hb_005527_060 Hb_000011_560--Hb_005527_060 Hb_003664_030 Hb_003664_030 Hb_000011_560--Hb_003664_030 Hb_000334_050 Hb_000334_050 Hb_004545_120--Hb_000334_050 Hb_000235_070 Hb_000235_070 Hb_004545_120--Hb_000235_070 Hb_000307_070 Hb_000307_070 Hb_004545_120--Hb_000307_070 Hb_011476_030 Hb_011476_030 Hb_004545_120--Hb_011476_030 Hb_015967_030 Hb_015967_030 Hb_004545_120--Hb_015967_030 Hb_000270_280 Hb_000270_280 Hb_000310_060--Hb_000270_280 Hb_003398_040 Hb_003398_040 Hb_000310_060--Hb_003398_040 Hb_000310_060--Hb_001587_040 Hb_000940_030 Hb_000940_030 Hb_000310_060--Hb_000940_030 Hb_000310_060--Hb_000327_200 Hb_000310_060--Hb_005527_060 Hb_001587_040--Hb_003398_040 Hb_001587_040--Hb_005527_060 Hb_000996_080 Hb_000996_080 Hb_001587_040--Hb_000996_080 Hb_001587_040--Hb_000307_070 Hb_001390_100 Hb_001390_100 Hb_001587_040--Hb_001390_100 Hb_000069_360 Hb_000069_360 Hb_000327_200--Hb_000069_360 Hb_000327_200--Hb_000996_080 Hb_003020_250 Hb_003020_250 Hb_000327_200--Hb_003020_250 Hb_000327_200--Hb_001587_040 Hb_000327_200--Hb_000334_050 Hb_002432_050 Hb_002432_050 Hb_005527_060--Hb_002432_050 Hb_005527_060--Hb_003398_040 Hb_000589_170 Hb_000589_170 Hb_005527_060--Hb_000589_170 Hb_000264_280 Hb_000264_280 Hb_003664_030--Hb_000264_280 Hb_003948_020 Hb_003948_020 Hb_003664_030--Hb_003948_020 Hb_005784_030 Hb_005784_030 Hb_003664_030--Hb_005784_030 Hb_148146_010 Hb_148146_010 Hb_003664_030--Hb_148146_010 Hb_003752_090 Hb_003752_090 Hb_003664_030--Hb_003752_090 Hb_000834_060 Hb_000834_060 Hb_003664_030--Hb_000834_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.54538 5.10912 19.1232 7.06001 0.372581 0.345397
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.80069 3.19654 2.41791 3.13189 12.4765

CAGE analysis