Hb_000014_140

Information

Type -
Description -
Location Contig14: 277264-281605
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa021229mg
description hypothetical protein
nr
ID XP_007213082.1
description hypothetical protein PRUPE_ppa021229mg [Prunus persica]
swissprot
ID P0CT39
description Transposon Tf2-6 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-6 PE=3 SV=1
trembl
ID M5WLY8
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021229mg PE=4 SV=1
Gene Ontology
ID GO:0005488
description dna rna polymerases superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000014_140 0.0 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
2 Hb_008453_070 0.1742372556 - - putative aquaporin [Vitis vinifera]
3 Hb_005389_010 0.2113714697 - - hypothetical protein PRUPE_ppa016115mg [Prunus persica]
4 Hb_189237_010 0.2242703101 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
5 Hb_001250_120 0.237840233 - - PREDICTED: homeobox protein knotted-1-like 6 [Jatropha curcas]
6 Hb_050495_010 0.2429369733 - - heat-shock protein, putative [Ricinus communis]
7 Hb_001250_110 0.2441450956 transcription factor TF Family: HB hypothetical protein POPTR_0010s05340g [Populus trichocarpa]
8 Hb_001565_120 0.2483663072 - - PREDICTED: probable glutamate carboxypeptidase 2 isoform X1 [Jatropha curcas]
9 Hb_001922_160 0.2623063707 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
10 Hb_001584_220 0.2669893524 - - galactinol synthase [Manihot esculenta]
11 Hb_084611_010 0.2706822264 - - PREDICTED: uncharacterized protein LOC104249812 [Nicotiana sylvestris]
12 Hb_144951_010 0.2728397856 - - putative reverse transcriptase [Oryza sativa Japonica Group]
13 Hb_002411_140 0.2728924101 - - PREDICTED: cytosolic sulfotransferase 15-like [Jatropha curcas]
14 Hb_000359_110 0.2782659965 transcription factor TF Family: NAC NAC domain-containing protein 42 [Theobroma cacao]
15 Hb_126907_010 0.2808808994 - - -
16 Hb_154471_010 0.284215327 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
17 Hb_001514_040 0.284536731 - - l-asparaginase, putative [Ricinus communis]
18 Hb_002641_100 0.286214481 - - PREDICTED: uncharacterized protein LOC105115446 [Populus euphratica]
19 Hb_090459_010 0.2929802495 - - hypothetical protein POPTR_0005s042901g, partial [Populus trichocarpa]
20 Hb_004108_010 0.2955224554 - - -

Gene co-expression network

sample Hb_000014_140 Hb_000014_140 Hb_008453_070 Hb_008453_070 Hb_000014_140--Hb_008453_070 Hb_005389_010 Hb_005389_010 Hb_000014_140--Hb_005389_010 Hb_189237_010 Hb_189237_010 Hb_000014_140--Hb_189237_010 Hb_001250_120 Hb_001250_120 Hb_000014_140--Hb_001250_120 Hb_050495_010 Hb_050495_010 Hb_000014_140--Hb_050495_010 Hb_001250_110 Hb_001250_110 Hb_000014_140--Hb_001250_110 Hb_001922_160 Hb_001922_160 Hb_008453_070--Hb_001922_160 Hb_002411_140 Hb_002411_140 Hb_008453_070--Hb_002411_140 Hb_001514_040 Hb_001514_040 Hb_008453_070--Hb_001514_040 Hb_008453_070--Hb_001250_110 Hb_001565_120 Hb_001565_120 Hb_008453_070--Hb_001565_120 Hb_005389_010--Hb_189237_010 Hb_144951_010 Hb_144951_010 Hb_005389_010--Hb_144951_010 Hb_004108_010 Hb_004108_010 Hb_005389_010--Hb_004108_010 Hb_084611_010 Hb_084611_010 Hb_005389_010--Hb_084611_010 Hb_033623_010 Hb_033623_010 Hb_005389_010--Hb_033623_010 Hb_189237_010--Hb_144951_010 Hb_189237_010--Hb_004108_010 Hb_189237_010--Hb_033623_010 Hb_041177_010 Hb_041177_010 Hb_189237_010--Hb_041177_010 Hb_189237_010--Hb_050495_010 Hb_001250_120--Hb_001250_110 Hb_054649_020 Hb_054649_020 Hb_001250_120--Hb_054649_020 Hb_001250_120--Hb_001565_120 Hb_000813_080 Hb_000813_080 Hb_001250_120--Hb_000813_080 Hb_167316_010 Hb_167316_010 Hb_001250_120--Hb_167316_010 Hb_050495_010--Hb_167316_010 Hb_050495_010--Hb_144951_010 Hb_116685_010 Hb_116685_010 Hb_050495_010--Hb_116685_010 Hb_050495_010--Hb_001565_120 Hb_050495_010--Hb_004108_010 Hb_000849_110 Hb_000849_110 Hb_001250_110--Hb_000849_110 Hb_001250_110--Hb_084611_010 Hb_000117_170 Hb_000117_170 Hb_001250_110--Hb_000117_170 Hb_126907_010 Hb_126907_010 Hb_001250_110--Hb_126907_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0263067 0.62962 0 0 0.0387681 0.151224
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0253204 0.0199258 0 0.0434367 0

CAGE analysis