Hb_000020_020

Information

Type -
Description -
Location Contig20: 30504-31124
Sequence    

Annotation

kegg
ID eus:EUTSA_v10017974mg
description hypothetical protein
nr
ID KDP46703.1
description hypothetical protein JCGZ_06491 [Jatropha curcas]
swissprot
ID O80763
description Probable nucleoredoxin 1 OS=Arabidopsis thaliana GN=At1g60420 PE=1 SV=1
trembl
ID A0A067LHA8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06491 PE=4 SV=1
Gene Ontology
ID GO:0044699
description cysteine histidine-rich c1 domain family

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000020_020 0.0 - - hypothetical protein JCGZ_06491 [Jatropha curcas]
2 Hb_093364_010 0.079244404 - - PREDICTED: uncharacterized protein LOC105636199 [Jatropha curcas]
3 Hb_001918_030 0.0957351194 - - -
4 Hb_004611_050 0.0976461048 - - PREDICTED: uncharacterized protein LOC105628744 [Jatropha curcas]
5 Hb_029095_010 0.1012031772 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_21060 [Jatropha curcas]
6 Hb_001266_130 0.1025182949 - - PREDICTED: soluble inorganic pyrophosphatase-like [Jatropha curcas]
7 Hb_000046_430 0.1129068148 - - hypothetical protein JCGZ_02013 [Jatropha curcas]
8 Hb_007120_130 0.1154022797 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000189_160 0.1164694396 - - PREDICTED: GDP-mannose 3,5-epimerase 2 [Eucalyptus grandis]
10 Hb_006789_030 0.1180437248 - - PREDICTED: wall-associated receptor kinase-like 22 [Prunus mume]
11 Hb_137272_010 0.1197368276 - - PREDICTED: cysteine-rich receptor-like protein kinase 10 [Jatropha curcas]
12 Hb_000185_170 0.1209837929 - - ATP binding protein, putative [Ricinus communis]
13 Hb_002030_090 0.1211060376 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
14 Hb_000990_040 0.1225874289 transcription factor TF Family: CPP PREDICTED: protein tesmin/TSO1-like CXC 7 [Jatropha curcas]
15 Hb_000987_020 0.1260477485 - - PREDICTED: protein trichome birefringence-like 35 [Jatropha curcas]
16 Hb_006266_010 0.128360475 - - unnamed protein product [Vitis vinifera]
17 Hb_009102_010 0.1290828436 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
18 Hb_001501_020 0.1290871081 - - PREDICTED: receptor-like protein kinase [Jatropha curcas]
19 Hb_078582_010 0.1294931558 - - hypothetical protein POPTR_0005s01620g [Populus trichocarpa]
20 Hb_000062_050 0.1319343896 - - protein binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000020_020 Hb_000020_020 Hb_093364_010 Hb_093364_010 Hb_000020_020--Hb_093364_010 Hb_001918_030 Hb_001918_030 Hb_000020_020--Hb_001918_030 Hb_004611_050 Hb_004611_050 Hb_000020_020--Hb_004611_050 Hb_029095_010 Hb_029095_010 Hb_000020_020--Hb_029095_010 Hb_001266_130 Hb_001266_130 Hb_000020_020--Hb_001266_130 Hb_000046_430 Hb_000046_430 Hb_000020_020--Hb_000046_430 Hb_093364_010--Hb_029095_010 Hb_000990_040 Hb_000990_040 Hb_093364_010--Hb_000990_040 Hb_093364_010--Hb_004611_050 Hb_005486_020 Hb_005486_020 Hb_093364_010--Hb_005486_020 Hb_000185_170 Hb_000185_170 Hb_093364_010--Hb_000185_170 Hb_005016_080 Hb_005016_080 Hb_001918_030--Hb_005016_080 Hb_137272_010 Hb_137272_010 Hb_001918_030--Hb_137272_010 Hb_001918_030--Hb_093364_010 Hb_001918_030--Hb_029095_010 Hb_094439_010 Hb_094439_010 Hb_001918_030--Hb_094439_010 Hb_004611_050--Hb_000990_040 Hb_004117_280 Hb_004117_280 Hb_004611_050--Hb_004117_280 Hb_004611_050--Hb_029095_010 Hb_004611_050--Hb_000185_170 Hb_029095_010--Hb_005486_020 Hb_029095_010--Hb_000990_040 Hb_002596_090 Hb_002596_090 Hb_029095_010--Hb_002596_090 Hb_031685_010 Hb_031685_010 Hb_029095_010--Hb_031685_010 Hb_008878_020 Hb_008878_020 Hb_001266_130--Hb_008878_020 Hb_000212_270 Hb_000212_270 Hb_001266_130--Hb_000212_270 Hb_000062_050 Hb_000062_050 Hb_001266_130--Hb_000062_050 Hb_001501_020 Hb_001501_020 Hb_001266_130--Hb_001501_020 Hb_001266_130--Hb_000046_430 Hb_000189_160 Hb_000189_160 Hb_000046_430--Hb_000189_160 Hb_003849_030 Hb_003849_030 Hb_000046_430--Hb_003849_030 Hb_003224_010 Hb_003224_010 Hb_000046_430--Hb_003224_010 Hb_000689_010 Hb_000689_010 Hb_000046_430--Hb_000689_010 Hb_030982_050 Hb_030982_050 Hb_000046_430--Hb_030982_050 Hb_000046_430--Hb_004611_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.597947 1.62267 0.456479 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.586613 0.880612

CAGE analysis