Hb_000020_210

Information

Type -
Description -
Location Contig20: 386806-387826
Sequence    

Annotation

kegg
ID rcu:RCOM_0519530
description UDP-glucosyltransferase, putative (EC:2.4.1.121)
nr
ID KDP45741.1
description hypothetical protein JCGZ_17348 [Jatropha curcas]
swissprot
ID O64733
description UDP-glycosyltransferase 87A2 OS=Arabidopsis thaliana GN=UGT87A2 PE=1 SV=1
trembl
ID A0A067LBB4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17348 PE=4 SV=1
Gene Ontology
ID GO:0047215
description udp-glycosyltransferase 87a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_20174: 373910-388003
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000020_210 0.0 - - hypothetical protein JCGZ_17348 [Jatropha curcas]
2 Hb_009222_040 0.0661497639 transcription factor TF Family: C2C2-Dof DNA binding with one finger 2.4, putative [Theobroma cacao]
3 Hb_005111_020 0.0722136196 - - hypothetical protein CISIN_1g0417821mg, partial [Citrus sinensis]
4 Hb_001427_100 0.0802054525 - - acc synthase, putative [Ricinus communis]
5 Hb_001405_170 0.093241315 - - aspartyl protease family protein [Populus trichocarpa]
6 Hb_122951_010 0.0941095843 - - PREDICTED: uncharacterized protein LOC105639235 [Jatropha curcas]
7 Hb_039946_060 0.0948550085 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor TINY-like [Jatropha curcas]
8 Hb_002960_030 0.0958856019 - - hypothetical protein POPTR_0002s02190g [Populus trichocarpa]
9 Hb_002053_190 0.0985602272 transcription factor TF Family: G2-like PREDICTED: uncharacterized protein LOC105639296 isoform X1 [Jatropha curcas]
10 Hb_002534_070 0.0996677169 - - PREDICTED: uncharacterized protein LOC105640545 [Jatropha curcas]
11 Hb_043630_030 0.1012829311 - - leucine-rich repeat transmembrane protein kinase [Populus trichocarpa]
12 Hb_000849_030 0.1013533169 - - PREDICTED: fimbrin-2 [Jatropha curcas]
13 Hb_001408_080 0.1041641065 - - PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 [Jatropha curcas]
14 Hb_000000_320 0.1080426436 - - PREDICTED: calcium uniporter protein 4, mitochondrial [Jatropha curcas]
15 Hb_017862_030 0.1096032628 - - PREDICTED: proteasome assembly chaperone 4 [Jatropha curcas]
16 Hb_001477_060 0.1130746431 transcription factor TF Family: C2H2 zinc finger family protein [Populus trichocarpa]
17 Hb_005741_030 0.1153360901 - - PREDICTED: PI-PLC X domain-containing protein At5g67130-like [Jatropha curcas]
18 Hb_002762_100 0.1159996083 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_003023_030 0.1167655101 - - PREDICTED: MATE efflux family protein 5-like isoform X1 [Citrus sinensis]
20 Hb_081864_010 0.1167677699 - - ankyrin repeat-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000020_210 Hb_000020_210 Hb_009222_040 Hb_009222_040 Hb_000020_210--Hb_009222_040 Hb_005111_020 Hb_005111_020 Hb_000020_210--Hb_005111_020 Hb_001427_100 Hb_001427_100 Hb_000020_210--Hb_001427_100 Hb_001405_170 Hb_001405_170 Hb_000020_210--Hb_001405_170 Hb_122951_010 Hb_122951_010 Hb_000020_210--Hb_122951_010 Hb_039946_060 Hb_039946_060 Hb_000020_210--Hb_039946_060 Hb_001477_060 Hb_001477_060 Hb_009222_040--Hb_001477_060 Hb_009222_040--Hb_001405_170 Hb_002053_190 Hb_002053_190 Hb_009222_040--Hb_002053_190 Hb_002890_330 Hb_002890_330 Hb_009222_040--Hb_002890_330 Hb_009222_040--Hb_001427_100 Hb_001110_060 Hb_001110_060 Hb_005111_020--Hb_001110_060 Hb_001408_080 Hb_001408_080 Hb_005111_020--Hb_001408_080 Hb_005111_020--Hb_001427_100 Hb_000000_320 Hb_000000_320 Hb_005111_020--Hb_000000_320 Hb_005111_020--Hb_122951_010 Hb_001427_100--Hb_039946_060 Hb_001427_100--Hb_001408_080 Hb_010164_030 Hb_010164_030 Hb_001427_100--Hb_010164_030 Hb_000012_350 Hb_000012_350 Hb_001427_100--Hb_000012_350 Hb_001405_170--Hb_002053_190 Hb_002960_030 Hb_002960_030 Hb_001405_170--Hb_002960_030 Hb_081864_010 Hb_081864_010 Hb_001405_170--Hb_081864_010 Hb_001541_210 Hb_001541_210 Hb_001405_170--Hb_001541_210 Hb_009771_040 Hb_009771_040 Hb_001405_170--Hb_009771_040 Hb_002168_070 Hb_002168_070 Hb_001405_170--Hb_002168_070 Hb_043630_030 Hb_043630_030 Hb_122951_010--Hb_043630_030 Hb_017862_030 Hb_017862_030 Hb_122951_010--Hb_017862_030 Hb_002522_040 Hb_002522_040 Hb_122951_010--Hb_002522_040 Hb_000849_030 Hb_000849_030 Hb_122951_010--Hb_000849_030 Hb_005741_030 Hb_005741_030 Hb_039946_060--Hb_005741_030 Hb_039946_060--Hb_001405_170 Hb_039946_060--Hb_000012_350 Hb_003054_070 Hb_003054_070 Hb_039946_060--Hb_003054_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0314718 2.96445 2.79971 7.57394 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.274164 2.30006

CAGE analysis