Hb_000021_010

Information

Type -
Description -
Location Contig21: 14470-14721
Sequence    

Annotation

kegg
ID rcu:RCOM_0373660
description hypothetical protein
nr
ID XP_002532075.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9T1F7
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0373660 PE=4 SV=1
Gene Ontology
ID GO:0001101
description conserved hypothetical protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000021_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_001318_180 0.0919779325 - - PREDICTED: protein NIM1-INTERACTING 1 [Jatropha curcas]
3 Hb_004007_190 0.100425517 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein AZF2-like [Jatropha curcas]
4 Hb_003529_010 0.1005697049 - - PREDICTED: disease resistance protein RPS6-like [Jatropha curcas]
5 Hb_004157_060 0.1097041964 - - PREDICTED: xyloglucan endotransglucosylase/hydrolase protein 22-like [Jatropha curcas]
6 Hb_001675_260 0.1193078373 - - nitrate transporter, putative [Ricinus communis]
7 Hb_003906_150 0.1322110528 - - peptidoglycan-binding LysM domain-containing family protein, partial [Populus trichocarpa]
8 Hb_002548_010 0.1332888203 - - hypothetical protein EUGRSUZ_L00530 [Eucalyptus grandis]
9 Hb_000203_090 0.1367666486 - - hypothetical protein POPTR_0013s04080g [Populus trichocarpa]
10 Hb_000167_090 0.1370318403 - - conserved hypothetical protein [Ricinus communis]
11 Hb_002025_120 0.139773555 transcription factor TF Family: Trihelix PREDICTED: uncharacterized protein LOC105634212 [Jatropha curcas]
12 Hb_182625_010 0.1406242521 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
13 Hb_001115_100 0.1418325951 - - PREDICTED: uncharacterized protein LOC103714121 [Phoenix dactylifera]
14 Hb_000604_050 0.1464171083 - - PREDICTED: mechanosensitive ion channel protein 8-like [Jatropha curcas]
15 Hb_027402_110 0.1471869773 - - PREDICTED: uncharacterized protein LOC105640545 [Jatropha curcas]
16 Hb_000769_050 0.1480323543 - - hypothetical protein CISIN_1g030637mg [Citrus sinensis]
17 Hb_001766_140 0.1502068797 - - hypothetical protein JCGZ_18656 [Jatropha curcas]
18 Hb_001195_650 0.1503930956 - - PREDICTED: calcium uniporter protein 4, mitochondrial [Jatropha curcas]
19 Hb_017549_010 0.1521743682 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_00222 [Jatropha curcas]
20 Hb_002422_010 0.1523435191 - - E3 ubiquitin-protein ligase UPL5 [Theobroma cacao]

Gene co-expression network

sample Hb_000021_010 Hb_000021_010 Hb_001318_180 Hb_001318_180 Hb_000021_010--Hb_001318_180 Hb_004007_190 Hb_004007_190 Hb_000021_010--Hb_004007_190 Hb_003529_010 Hb_003529_010 Hb_000021_010--Hb_003529_010 Hb_004157_060 Hb_004157_060 Hb_000021_010--Hb_004157_060 Hb_001675_260 Hb_001675_260 Hb_000021_010--Hb_001675_260 Hb_003906_150 Hb_003906_150 Hb_000021_010--Hb_003906_150 Hb_001318_180--Hb_004007_190 Hb_001318_180--Hb_001675_260 Hb_001318_180--Hb_003529_010 Hb_001318_180--Hb_003906_150 Hb_027402_110 Hb_027402_110 Hb_001318_180--Hb_027402_110 Hb_002025_120 Hb_002025_120 Hb_004007_190--Hb_002025_120 Hb_004007_190--Hb_003529_010 Hb_004007_190--Hb_001675_260 Hb_000604_050 Hb_000604_050 Hb_004007_190--Hb_000604_050 Hb_003529_010--Hb_001675_260 Hb_003529_010--Hb_000604_050 Hb_002783_210 Hb_002783_210 Hb_003529_010--Hb_002783_210 Hb_004157_060--Hb_001675_260 Hb_004157_060--Hb_027402_110 Hb_001766_140 Hb_001766_140 Hb_004157_060--Hb_001766_140 Hb_004157_060--Hb_001318_180 Hb_006187_020 Hb_006187_020 Hb_004157_060--Hb_006187_020 Hb_001675_260--Hb_027402_110 Hb_001675_260--Hb_000604_050 Hb_003906_150--Hb_000604_050 Hb_008566_070 Hb_008566_070 Hb_003906_150--Hb_008566_070 Hb_111985_090 Hb_111985_090 Hb_003906_150--Hb_111985_090 Hb_003906_150--Hb_004007_190 Hb_000983_110 Hb_000983_110 Hb_003906_150--Hb_000983_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 32.9493 9.32322 50.6687 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.968562 0 0.68153 1.32768

CAGE analysis