Hb_000021_030

Information

Type -
Description -
Location Contig21: 50487-70942
Sequence    

Annotation

kegg
ID rcu:RCOM_0373640
description Insulin-degrading enzyme, putative (EC:3.4.24.56)
nr
ID XP_012086164.1
description PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]
swissprot
ID O22941
description Zinc-metallopeptidase, peroxisomal OS=Arabidopsis thaliana GN=PXM16 PE=2 SV=1
trembl
ID A0A067JQ91
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21090 PE=3 SV=1
Gene Ontology
ID GO:0004222
description zinc- peroxisomal-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_21712: 51917-52294 , PASA_asmbl_21713: 38468-71013
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000021_030 0.0 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]
2 Hb_011716_020 0.111900179 - - PREDICTED: uncharacterized protein LOC105637783 [Jatropha curcas]
3 Hb_000470_080 0.1132401503 - - Caldesmon, putative [Ricinus communis]
4 Hb_011310_160 0.1187619348 - - PREDICTED: RNA-dependent RNA polymerase 6-like [Jatropha curcas]
5 Hb_000613_080 0.120473941 - - PREDICTED: mucin-5AC-like [Nicotiana sylvestris]
6 Hb_002028_170 0.120979875 - - PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 5 [Jatropha curcas]
7 Hb_001675_070 0.121995214 - - eukaryotic translation elongation factor, putative [Ricinus communis]
8 Hb_005147_060 0.1230639589 - - PREDICTED: shaggy-related protein kinase kappa [Populus euphratica]
9 Hb_058643_010 0.1233554585 - - hydrolase, putative [Ricinus communis]
10 Hb_118840_030 0.1247830239 - - PREDICTED: vacuolar protein sorting-associated protein 18 homolog [Jatropha curcas]
11 Hb_002260_080 0.1260351678 - - Aldehyde dehydrogenase family 6 member B2 [Morus notabilis]
12 Hb_001541_080 0.1275754324 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001617_060 0.1326744882 - - PREDICTED: polyadenylate-binding protein RBP45B isoform X1 [Jatropha curcas]
14 Hb_002600_140 0.1328375483 - - PREDICTED: protein FLX-like 2 [Jatropha curcas]
15 Hb_001621_130 0.1342081513 - - PREDICTED: pumilio homolog 1-like isoform X1 [Jatropha curcas]
16 Hb_001143_110 0.1346118549 - - hypothetical protein JCGZ_12107 [Jatropha curcas]
17 Hb_000739_220 0.1349742533 - - PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [Jatropha curcas]
18 Hb_010427_010 0.1357773139 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_06191 [Jatropha curcas]
19 Hb_011928_020 0.137106542 - - something about silencing protein sas10, putative [Ricinus communis]
20 Hb_003449_070 0.1372732546 transcription factor TF Family: SNF2 DNA repair helicase rad5,16, putative [Ricinus communis]

Gene co-expression network

sample Hb_000021_030 Hb_000021_030 Hb_011716_020 Hb_011716_020 Hb_000021_030--Hb_011716_020 Hb_000470_080 Hb_000470_080 Hb_000021_030--Hb_000470_080 Hb_011310_160 Hb_011310_160 Hb_000021_030--Hb_011310_160 Hb_000613_080 Hb_000613_080 Hb_000021_030--Hb_000613_080 Hb_002028_170 Hb_002028_170 Hb_000021_030--Hb_002028_170 Hb_001675_070 Hb_001675_070 Hb_000021_030--Hb_001675_070 Hb_011716_020--Hb_002028_170 Hb_002974_060 Hb_002974_060 Hb_011716_020--Hb_002974_060 Hb_002600_140 Hb_002600_140 Hb_011716_020--Hb_002600_140 Hb_000023_190 Hb_000023_190 Hb_011716_020--Hb_000023_190 Hb_002027_270 Hb_002027_270 Hb_011716_020--Hb_002027_270 Hb_000600_070 Hb_000600_070 Hb_011716_020--Hb_000600_070 Hb_007805_010 Hb_007805_010 Hb_000470_080--Hb_007805_010 Hb_005679_050 Hb_005679_050 Hb_000470_080--Hb_005679_050 Hb_000470_080--Hb_002974_060 Hb_000470_080--Hb_011310_160 Hb_011928_020 Hb_011928_020 Hb_000470_080--Hb_011928_020 Hb_003294_090 Hb_003294_090 Hb_000470_080--Hb_003294_090 Hb_000398_120 Hb_000398_120 Hb_011310_160--Hb_000398_120 Hb_006660_010 Hb_006660_010 Hb_011310_160--Hb_006660_010 Hb_003988_010 Hb_003988_010 Hb_011310_160--Hb_003988_010 Hb_025477_040 Hb_025477_040 Hb_011310_160--Hb_025477_040 Hb_010174_040 Hb_010174_040 Hb_011310_160--Hb_010174_040 Hb_011310_160--Hb_002974_060 Hb_001617_060 Hb_001617_060 Hb_000613_080--Hb_001617_060 Hb_003966_030 Hb_003966_030 Hb_000613_080--Hb_003966_030 Hb_174821_010 Hb_174821_010 Hb_000613_080--Hb_174821_010 Hb_003449_070 Hb_003449_070 Hb_000613_080--Hb_003449_070 Hb_003044_020 Hb_003044_020 Hb_000613_080--Hb_003044_020 Hb_000922_370 Hb_000922_370 Hb_000613_080--Hb_000922_370 Hb_003623_030 Hb_003623_030 Hb_002028_170--Hb_003623_030 Hb_000158_100 Hb_000158_100 Hb_002028_170--Hb_000158_100 Hb_000136_060 Hb_000136_060 Hb_002028_170--Hb_000136_060 Hb_007904_220 Hb_007904_220 Hb_002028_170--Hb_007904_220 Hb_000343_030 Hb_000343_030 Hb_002028_170--Hb_000343_030 Hb_000209_070 Hb_000209_070 Hb_001675_070--Hb_000209_070 Hb_001541_080 Hb_001541_080 Hb_001675_070--Hb_001541_080 Hb_001143_110 Hb_001143_110 Hb_001675_070--Hb_001143_110 Hb_003464_020 Hb_003464_020 Hb_001675_070--Hb_003464_020 Hb_001675_070--Hb_011716_020 Hb_000347_130 Hb_000347_130 Hb_001675_070--Hb_000347_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
25.5961 15.444 14.08 26.3136 38.4427 62.4517
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.1165 5.00326 24.5931 52.9473 17.2428

CAGE analysis