Hb_000021_100

Information

Type -
Description -
Location Contig21: 278285-283935
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000021_100 0.0 - - -
2 Hb_011206_010 0.2091198662 - - PREDICTED: something about silencing protein 10 isoform X2 [Vitis vinifera]
3 Hb_000085_090 0.2225389137 - - hypothetical protein JCGZ_00955 [Jatropha curcas]
4 Hb_000733_270 0.2262760881 - - PREDICTED: serine/threonine-protein phosphatase PP1-alpha catalytic subunit [Dasypus novemcinctus]
5 Hb_002235_140 0.2334692339 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000027_030 0.2358297808 - - Uncharacterized protein isoform 1 [Theobroma cacao]
7 Hb_007380_110 0.2363001002 - - hypothetical protein JCGZ_16415 [Jatropha curcas]
8 Hb_000122_140 0.2456089148 - - -
9 Hb_000221_120 0.2472101869 - - PREDICTED: uncharacterized protein At1g04910 isoform X2 [Jatropha curcas]
10 Hb_121467_010 0.2495491571 - - tubulin-specific chaperone E, putative [Ricinus communis]
11 Hb_004770_050 0.250798974 - - PREDICTED: serine carboxypeptidase-like 35 [Populus euphratica]
12 Hb_057490_010 0.2508183231 - - PREDICTED: mannose-1-phosphate guanyltransferase alpha [Jatropha curcas]
13 Hb_000181_250 0.254108923 - - PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 [Jatropha curcas]
14 Hb_000703_210 0.2541120804 - - Inactive protein kinase [Gossypium arboreum]
15 Hb_005144_030 0.2553503958 - - PREDICTED: alpha-L-fucosidase 1 [Jatropha curcas]
16 Hb_019053_020 0.2554314181 - - hypothetical protein MIMGU_mgv1a0105441mg, partial [Erythranthe guttata]
17 Hb_000062_060 0.2558451847 transcription factor TF Family: Orphans multi-sensor hybrid histidine kinase [Plautia stali symbiont]
18 Hb_009848_040 0.2564995603 - - hypothetical protein B456_009G349600 [Gossypium raimondii]
19 Hb_012423_010 0.2573027928 - - -
20 Hb_000213_070 0.2577648953 transcription factor TF Family: ERF PREDICTED: AP2-like ethylene-responsive transcription factor At2g41710 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000021_100 Hb_000021_100 Hb_011206_010 Hb_011206_010 Hb_000021_100--Hb_011206_010 Hb_000085_090 Hb_000085_090 Hb_000021_100--Hb_000085_090 Hb_000733_270 Hb_000733_270 Hb_000021_100--Hb_000733_270 Hb_002235_140 Hb_002235_140 Hb_000021_100--Hb_002235_140 Hb_000027_030 Hb_000027_030 Hb_000021_100--Hb_000027_030 Hb_007380_110 Hb_007380_110 Hb_000021_100--Hb_007380_110 Hb_002815_060 Hb_002815_060 Hb_011206_010--Hb_002815_060 Hb_001731_020 Hb_001731_020 Hb_011206_010--Hb_001731_020 Hb_000213_070 Hb_000213_070 Hb_011206_010--Hb_000213_070 Hb_011206_010--Hb_000085_090 Hb_171788_010 Hb_171788_010 Hb_011206_010--Hb_171788_010 Hb_019053_020 Hb_019053_020 Hb_011206_010--Hb_019053_020 Hb_001492_010 Hb_001492_010 Hb_000085_090--Hb_001492_010 Hb_003050_370 Hb_003050_370 Hb_000085_090--Hb_003050_370 Hb_000703_210 Hb_000703_210 Hb_000085_090--Hb_000703_210 Hb_000959_250 Hb_000959_250 Hb_000085_090--Hb_000959_250 Hb_000085_090--Hb_000213_070 Hb_004724_120 Hb_004724_120 Hb_000733_270--Hb_004724_120 Hb_084470_010 Hb_084470_010 Hb_000733_270--Hb_084470_010 Hb_000733_270--Hb_002235_140 Hb_007785_010 Hb_007785_010 Hb_000733_270--Hb_007785_010 Hb_003073_170 Hb_003073_170 Hb_000733_270--Hb_003073_170 Hb_002918_090 Hb_002918_090 Hb_002235_140--Hb_002918_090 Hb_009848_040 Hb_009848_040 Hb_002235_140--Hb_009848_040 Hb_001396_150 Hb_001396_150 Hb_002235_140--Hb_001396_150 Hb_009848_030 Hb_009848_030 Hb_002235_140--Hb_009848_030 Hb_000375_370 Hb_000375_370 Hb_002235_140--Hb_000375_370 Hb_031089_030 Hb_031089_030 Hb_002235_140--Hb_031089_030 Hb_001675_070 Hb_001675_070 Hb_000027_030--Hb_001675_070 Hb_022250_110 Hb_022250_110 Hb_000027_030--Hb_022250_110 Hb_000027_030--Hb_000213_070 Hb_001976_090 Hb_001976_090 Hb_000027_030--Hb_001976_090 Hb_000108_080 Hb_000108_080 Hb_000027_030--Hb_000108_080 Hb_000209_070 Hb_000209_070 Hb_000027_030--Hb_000209_070 Hb_003995_010 Hb_003995_010 Hb_007380_110--Hb_003995_010 Hb_065525_030 Hb_065525_030 Hb_007380_110--Hb_065525_030 Hb_057490_010 Hb_057490_010 Hb_007380_110--Hb_057490_010 Hb_005000_100 Hb_005000_100 Hb_007380_110--Hb_005000_100 Hb_000814_090 Hb_000814_090 Hb_007380_110--Hb_000814_090 Hb_023327_030 Hb_023327_030 Hb_007380_110--Hb_023327_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.104446 0.0559261 0.0318208 0.0908325 0.171586 0.246723
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0307802 0.0242157 0 0.212615 0

CAGE analysis