Hb_000022_200

Information

Type -
Description -
Location Contig22: 290596-293051
Sequence    

Annotation

kegg
ID rcu:RCOM_0803520
description hypothetical protein
nr
ID XP_012077472.1
description PREDICTED: uncharacterized protein LOC105638292 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KDG5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07807 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_22623: 290617-292468 , PASA_asmbl_22624: 290617-293034
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000022_200 0.0 - - PREDICTED: uncharacterized protein LOC105638292 [Jatropha curcas]
2 Hb_000261_330 0.1151837362 - - PREDICTED: ER lumen protein-retaining receptor [Amborella trichopoda]
3 Hb_045770_010 0.1171506489 - - ER lumen protein retaining receptor [Populus trichocarpa]
4 Hb_002900_080 0.1223513046 - - PREDICTED: E3 ubiquitin-protein ligase MARCH8-like [Jatropha curcas]
5 Hb_002485_030 0.1225084975 - - PREDICTED: 2-dehydro-3-deoxyphosphooctonate aldolase 1-like [Jatropha curcas]
6 Hb_001085_260 0.1231009107 - - PREDICTED: uncharacterized protein LOC105633184 [Jatropha curcas]
7 Hb_007904_210 0.1236633576 - - PREDICTED: oxysterol-binding protein-related protein 1D [Jatropha curcas]
8 Hb_000072_090 0.1244676126 - - PREDICTED: SEC14 cytosolic factor [Jatropha curcas]
9 Hb_007919_080 0.1254385849 - - PREDICTED: uncharacterized protein At1g76660 isoform X1 [Jatropha curcas]
10 Hb_000103_120 0.127137836 transcription factor TF Family: CPP PREDICTED: protein tesmin/TSO1-like CXC 2 isoform X2 [Jatropha curcas]
11 Hb_009049_020 0.1320054178 - - PREDICTED: 2-dehydro-3-deoxyphosphooctonate aldolase 1-like [Jatropha curcas]
12 Hb_044662_060 0.1321949451 - - PREDICTED: long chain acyl-CoA synthetase 9, chloroplastic [Jatropha curcas]
13 Hb_002351_030 0.1329041811 - - catalytic, putative [Ricinus communis]
14 Hb_007017_080 0.1369042421 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
15 Hb_002942_060 0.138027693 - - RNA-binding protein, putative [Ricinus communis]
16 Hb_000208_260 0.1388742167 - - PREDICTED: acyl-CoA-binding domain-containing protein 4 [Jatropha curcas]
17 Hb_000556_150 0.1390142709 - - PREDICTED: fasciclin-like arabinogalactan protein 10 [Populus euphratica]
18 Hb_169631_010 0.140208041 - - MADS-box transcription factor, putative [Ricinus communis]
19 Hb_007951_040 0.1409944201 - - signal peptidase family protein [Populus trichocarpa]
20 Hb_002660_150 0.1420492036 - - PREDICTED: uncharacterized protein LOC105642207 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000022_200 Hb_000022_200 Hb_000261_330 Hb_000261_330 Hb_000022_200--Hb_000261_330 Hb_045770_010 Hb_045770_010 Hb_000022_200--Hb_045770_010 Hb_002900_080 Hb_002900_080 Hb_000022_200--Hb_002900_080 Hb_002485_030 Hb_002485_030 Hb_000022_200--Hb_002485_030 Hb_001085_260 Hb_001085_260 Hb_000022_200--Hb_001085_260 Hb_007904_210 Hb_007904_210 Hb_000022_200--Hb_007904_210 Hb_006405_050 Hb_006405_050 Hb_000261_330--Hb_006405_050 Hb_000261_330--Hb_001085_260 Hb_000300_200 Hb_000300_200 Hb_000261_330--Hb_000300_200 Hb_007017_080 Hb_007017_080 Hb_000261_330--Hb_007017_080 Hb_004324_390 Hb_004324_390 Hb_000261_330--Hb_004324_390 Hb_002660_150 Hb_002660_150 Hb_045770_010--Hb_002660_150 Hb_169631_010 Hb_169631_010 Hb_045770_010--Hb_169631_010 Hb_009049_020 Hb_009049_020 Hb_045770_010--Hb_009049_020 Hb_000170_200 Hb_000170_200 Hb_045770_010--Hb_000170_200 Hb_008120_010 Hb_008120_010 Hb_045770_010--Hb_008120_010 Hb_001205_250 Hb_001205_250 Hb_002900_080--Hb_001205_250 Hb_000007_390 Hb_000007_390 Hb_002900_080--Hb_000007_390 Hb_001227_130 Hb_001227_130 Hb_002900_080--Hb_001227_130 Hb_007919_080 Hb_007919_080 Hb_002900_080--Hb_007919_080 Hb_000445_050 Hb_000445_050 Hb_002900_080--Hb_000445_050 Hb_002485_030--Hb_001085_260 Hb_003760_030 Hb_003760_030 Hb_002485_030--Hb_003760_030 Hb_003119_090 Hb_003119_090 Hb_002485_030--Hb_003119_090 Hb_006816_100 Hb_006816_100 Hb_002485_030--Hb_006816_100 Hb_000103_120 Hb_000103_120 Hb_002485_030--Hb_000103_120 Hb_000494_080 Hb_000494_080 Hb_002485_030--Hb_000494_080 Hb_002960_150 Hb_002960_150 Hb_001085_260--Hb_002960_150 Hb_001085_260--Hb_003760_030 Hb_002284_210 Hb_002284_210 Hb_001085_260--Hb_002284_210 Hb_000207_150 Hb_000207_150 Hb_001085_260--Hb_000207_150 Hb_001085_260--Hb_003119_090 Hb_000300_600 Hb_000300_600 Hb_007904_210--Hb_000300_600 Hb_003206_090 Hb_003206_090 Hb_007904_210--Hb_003206_090 Hb_000072_090 Hb_000072_090 Hb_007904_210--Hb_000072_090 Hb_000371_090 Hb_000371_090 Hb_007904_210--Hb_000371_090 Hb_000556_150 Hb_000556_150 Hb_007904_210--Hb_000556_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
17.8341 2.57737 21.1811 23.7317 9.66479 15.8118
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.38426 5.1257 11.0694 7.56756 9.67745

CAGE analysis