Hb_000023_170

Information

Type -
Description -
Location Contig23: 419640-421071
Sequence    

Annotation

kegg
ID cit:102627286
description protein ASPARTIC PROTEASE IN GUARD CELL 2-like
nr
ID XP_012076385.1
description PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KNU6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07055 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000023_170 0.0 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Jatropha curcas]
2 Hb_009189_090 0.0131812298 - - protein phosphatase-2c, putative [Ricinus communis]
3 Hb_003702_010 0.020932118 - - PREDICTED: phospholipase A1-II 1-like [Jatropha curcas]
4 Hb_132840_060 0.033524199 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH57-like [Jatropha curcas]
5 Hb_008032_010 0.0358619432 - - Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
6 Hb_155874_020 0.0392201729 - - Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
7 Hb_005357_210 0.0434380581 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein MERISTEM L1 [Jatropha curcas]
8 Hb_008195_100 0.0489954874 transcription factor TF Family: C2C2-YABBY PREDICTED: protein YABBY 4 [Vitis vinifera]
9 Hb_006355_100 0.049583756 - - hypothetical protein glysoja_002455 [Glycine soja]
10 Hb_000853_340 0.0593873943 - - PREDICTED: kynurenine--oxoglutarate transaminase 1-like isoform X2 [Populus euphratica]
11 Hb_003729_050 0.0596209657 - - PREDICTED: vacuolar iron transporter 1-like isoform X1 [Jatropha curcas]
12 Hb_025048_050 0.0625595773 - - PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 3 [Jatropha curcas]
13 Hb_000173_330 0.0636353781 - - PREDICTED: glutamine synthetase leaf isozyme, chloroplastic [Vitis vinifera]
14 Hb_001946_070 0.0720140483 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
15 Hb_001329_060 0.0726969155 - - Polygalacturonase precursor, putative [Ricinus communis]
16 Hb_001033_080 0.0734526189 transcription factor TF Family: C2H2 Transcriptional regulator SUPERMAN, putative [Ricinus communis]
17 Hb_005375_100 0.0824296624 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH57-like [Jatropha curcas]
18 Hb_006649_100 0.0874090901 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
19 Hb_002028_070 0.0875724105 - - PREDICTED: circadian locomoter output cycles protein kaput [Jatropha curcas]
20 Hb_019762_030 0.0889188416 - - hypothetical protein POPTR_0002s08720g [Populus trichocarpa]

Gene co-expression network

sample Hb_000023_170 Hb_000023_170 Hb_009189_090 Hb_009189_090 Hb_000023_170--Hb_009189_090 Hb_003702_010 Hb_003702_010 Hb_000023_170--Hb_003702_010 Hb_132840_060 Hb_132840_060 Hb_000023_170--Hb_132840_060 Hb_008032_010 Hb_008032_010 Hb_000023_170--Hb_008032_010 Hb_155874_020 Hb_155874_020 Hb_000023_170--Hb_155874_020 Hb_005357_210 Hb_005357_210 Hb_000023_170--Hb_005357_210 Hb_009189_090--Hb_008032_010 Hb_009189_090--Hb_132840_060 Hb_009189_090--Hb_003702_010 Hb_006355_100 Hb_006355_100 Hb_009189_090--Hb_006355_100 Hb_009189_090--Hb_005357_210 Hb_003702_010--Hb_155874_020 Hb_003702_010--Hb_132840_060 Hb_003702_010--Hb_005357_210 Hb_000853_340 Hb_000853_340 Hb_003702_010--Hb_000853_340 Hb_132840_060--Hb_008032_010 Hb_132840_060--Hb_155874_020 Hb_003729_050 Hb_003729_050 Hb_132840_060--Hb_003729_050 Hb_132840_060--Hb_006355_100 Hb_008032_010--Hb_006355_100 Hb_008032_010--Hb_003729_050 Hb_008032_010--Hb_155874_020 Hb_155874_020--Hb_000853_340 Hb_008195_100 Hb_008195_100 Hb_155874_020--Hb_008195_100 Hb_025048_050 Hb_025048_050 Hb_005357_210--Hb_025048_050 Hb_001946_070 Hb_001946_070 Hb_005357_210--Hb_001946_070 Hb_001329_060 Hb_001329_060 Hb_005357_210--Hb_001329_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.438836 0.0315612 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.126709

CAGE analysis