Hb_000023_180

Information

Type -
Description -
Location Contig23: 429651-438757
Sequence    

Annotation

kegg
ID rcu:RCOM_0920320
description Aspartic proteinase nepenthesin-2 precursor, putative
nr
ID XP_002515388.1
description Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis]
swissprot
ID Q9LHE3
description Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana GN=ASPG2 PE=2 SV=1
trembl
ID M4CXQ9
description Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra009006 PE=4 SV=1
Gene Ontology
ID GO:0004190
description protein aspartic protease in guard cell 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_23946: 429494-431438 , PASA_asmbl_23947: 434867-438729
cDNA
(Sanger)
(ID:Location)		 014_M05.ab1: 435965-438729

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000023_180 0.0 - - Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis]
2 Hb_000000_290 0.0633494295 - - PREDICTED: probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 4 [Jatropha curcas]
3 Hb_005391_050 0.0838419308 - - PREDICTED: uncharacterized protein LOC105643654 [Jatropha curcas]
4 Hb_002835_070 0.0846375875 - - conserved hypothetical protein [Ricinus communis]
5 Hb_005329_030 0.0849181435 - - PREDICTED: NAD(P)H dehydrogenase (quinone) FQR1-like [Jatropha curcas]
6 Hb_001976_100 0.0946887837 - - PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X2 [Jatropha curcas]
7 Hb_001950_100 0.0999667279 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g37250 [Jatropha curcas]
8 Hb_000622_030 0.1030840722 - - PREDICTED: hydroquinone glucosyltransferase [Jatropha curcas]
9 Hb_006916_140 0.1110736743 - - PREDICTED: PI-PLC X domain-containing protein At5g67130-like [Jatropha curcas]
10 Hb_000963_120 0.1137243363 - - PREDICTED: uncharacterized protein LOC105628103 isoform X1 [Jatropha curcas]
11 Hb_002973_050 0.1146333128 - - hypothetical protein JCGZ_06491 [Jatropha curcas]
12 Hb_016277_030 0.1149171664 - - hypothetical protein JCGZ_16973 [Jatropha curcas]
13 Hb_004374_030 0.1175357453 - - PREDICTED: probable polygalacturonase [Jatropha curcas]
14 Hb_019925_020 0.1178935514 - - electron carrier, putative [Ricinus communis]
15 Hb_005183_100 0.1204950146 - - hypothetical protein CICLE_v10002898mg [Citrus clementina]
16 Hb_000009_250 0.1262177919 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
17 Hb_005723_090 0.126261053 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000856_210 0.1272434135 - - nitrate transporter, putative [Ricinus communis]
19 Hb_001232_040 0.1285740436 - - PREDICTED: uncharacterized protein LOC105634974 [Jatropha curcas]
20 Hb_001131_050 0.1286319818 - - hypothetical protein EUGRSUZ_C02968 [Eucalyptus grandis]

Gene co-expression network

sample Hb_000023_180 Hb_000023_180 Hb_000000_290 Hb_000000_290 Hb_000023_180--Hb_000000_290 Hb_005391_050 Hb_005391_050 Hb_000023_180--Hb_005391_050 Hb_002835_070 Hb_002835_070 Hb_000023_180--Hb_002835_070 Hb_005329_030 Hb_005329_030 Hb_000023_180--Hb_005329_030 Hb_001976_100 Hb_001976_100 Hb_000023_180--Hb_001976_100 Hb_001950_100 Hb_001950_100 Hb_000023_180--Hb_001950_100 Hb_000622_030 Hb_000622_030 Hb_000000_290--Hb_000622_030 Hb_005183_100 Hb_005183_100 Hb_000000_290--Hb_005183_100 Hb_005723_090 Hb_005723_090 Hb_000000_290--Hb_005723_090 Hb_000000_290--Hb_002835_070 Hb_016277_030 Hb_016277_030 Hb_000000_290--Hb_016277_030 Hb_008948_010 Hb_008948_010 Hb_005391_050--Hb_008948_010 Hb_142056_010 Hb_142056_010 Hb_005391_050--Hb_142056_010 Hb_005391_050--Hb_002835_070 Hb_001131_050 Hb_001131_050 Hb_005391_050--Hb_001131_050 Hb_005391_050--Hb_001976_100 Hb_002973_050 Hb_002973_050 Hb_002835_070--Hb_002973_050 Hb_133974_010 Hb_133974_010 Hb_002835_070--Hb_133974_010 Hb_004917_020 Hb_004917_020 Hb_002835_070--Hb_004917_020 Hb_182869_010 Hb_182869_010 Hb_002835_070--Hb_182869_010 Hb_006916_140 Hb_006916_140 Hb_005329_030--Hb_006916_140 Hb_004374_030 Hb_004374_030 Hb_005329_030--Hb_004374_030 Hb_000963_120 Hb_000963_120 Hb_005329_030--Hb_000963_120 Hb_004204_220 Hb_004204_220 Hb_005329_030--Hb_004204_220 Hb_005329_030--Hb_000000_290 Hb_000009_250 Hb_000009_250 Hb_001976_100--Hb_000009_250 Hb_004930_020 Hb_004930_020 Hb_001976_100--Hb_004930_020 Hb_001976_100--Hb_002835_070 Hb_001396_130 Hb_001396_130 Hb_001976_100--Hb_001396_130 Hb_000334_030 Hb_000334_030 Hb_001976_100--Hb_000334_030 Hb_001950_100--Hb_000622_030 Hb_001232_040 Hb_001232_040 Hb_001950_100--Hb_001232_040 Hb_001950_100--Hb_000000_290 Hb_005725_160 Hb_005725_160 Hb_001950_100--Hb_005725_160 Hb_002168_070 Hb_002168_070 Hb_001950_100--Hb_002168_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0931449 124.905 58.1055 440.983 0.073464 0.3214
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.123257 0.994174 0.139018 57.8976 343.65

CAGE analysis