Hb_000025_250

Information

Type -
Description -
Location Contig25: 213666-216042
Sequence    

Annotation

kegg
ID tcc:TCM_040896
description Flavonoid 3',5'-hydroxylase 2 isoform 1
nr
ID XP_012065863.1
description PREDICTED: flavonoid 3',5'-hydroxylase 2-like [Jatropha curcas]
swissprot
ID P48419
description Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1
trembl
ID A0A067L7K0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22745 PE=3 SV=1
Gene Ontology
ID GO:0005506
description flavonoid 3 -hydroxylase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_26075: 213801-215928
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000025_250 0.0 - - PREDICTED: flavonoid 3',5'-hydroxylase 2-like [Jatropha curcas]
2 Hb_014034_020 0.0429460317 - - hypothetical protein POPTR_0075s00200g, partial [Populus trichocarpa]
3 Hb_004254_070 0.0430534386 transcription factor TF Family: NAC hypothetical protein POPTR_0015s03700g [Populus trichocarpa]
4 Hb_018709_010 0.0439190898 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
5 Hb_020141_020 0.0486521244 - - -
6 Hb_005464_040 0.0490996929 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
7 Hb_000563_080 0.049329451 - - -
8 Hb_003188_020 0.0507592552 - - chitinase, putative [Ricinus communis]
9 Hb_001301_020 0.0507975421 - - hypothetical protein JCGZ_06575 [Jatropha curcas]
10 Hb_000446_100 0.0576302176 - - PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Jatropha curcas]
11 Hb_028013_010 0.0580336883 - - alcohol dehydrogenase, putative [Ricinus communis]
12 Hb_000500_190 0.058666014 - - hypothetical protein JCGZ_21655 [Jatropha curcas]
13 Hb_100786_010 0.069488955 - - hypothetical protein B456_008G202600 [Gossypium raimondii]
14 Hb_000229_080 0.0725635128 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
15 Hb_153208_010 0.075217785 - - Cationic peroxidase 2 precursor, putative [Ricinus communis]
16 Hb_001032_060 0.0760919257 - - PREDICTED: ankyrin-2-like [Citrus sinensis]
17 Hb_010358_010 0.0767523243 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
18 Hb_000405_040 0.0770885533 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
19 Hb_009780_060 0.0797681155 rubber biosynthesis Gene Name: Geranyl geranyl diphosphate synthase geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
20 Hb_000589_280 0.0806675378 - - PREDICTED: glycerol-3-phosphate acyltransferase 5 [Jatropha curcas]

Gene co-expression network

sample Hb_000025_250 Hb_000025_250 Hb_014034_020 Hb_014034_020 Hb_000025_250--Hb_014034_020 Hb_004254_070 Hb_004254_070 Hb_000025_250--Hb_004254_070 Hb_018709_010 Hb_018709_010 Hb_000025_250--Hb_018709_010 Hb_020141_020 Hb_020141_020 Hb_000025_250--Hb_020141_020 Hb_005464_040 Hb_005464_040 Hb_000025_250--Hb_005464_040 Hb_000563_080 Hb_000563_080 Hb_000025_250--Hb_000563_080 Hb_014034_020--Hb_004254_070 Hb_003188_020 Hb_003188_020 Hb_014034_020--Hb_003188_020 Hb_000500_190 Hb_000500_190 Hb_014034_020--Hb_000500_190 Hb_000446_100 Hb_000446_100 Hb_014034_020--Hb_000446_100 Hb_001301_020 Hb_001301_020 Hb_014034_020--Hb_001301_020 Hb_004254_070--Hb_000446_100 Hb_004254_070--Hb_003188_020 Hb_004254_070--Hb_000500_190 Hb_004254_070--Hb_001301_020 Hb_028013_010 Hb_028013_010 Hb_018709_010--Hb_028013_010 Hb_018709_010--Hb_020141_020 Hb_100786_010 Hb_100786_010 Hb_018709_010--Hb_100786_010 Hb_001032_060 Hb_001032_060 Hb_018709_010--Hb_001032_060 Hb_000419_080 Hb_000419_080 Hb_018709_010--Hb_000419_080 Hb_020141_020--Hb_000563_080 Hb_020141_020--Hb_003188_020 Hb_010358_010 Hb_010358_010 Hb_020141_020--Hb_010358_010 Hb_153208_010 Hb_153208_010 Hb_020141_020--Hb_153208_010 Hb_020141_020--Hb_014034_020 Hb_005464_040--Hb_000563_080 Hb_005464_040--Hb_001301_020 Hb_005464_040--Hb_003188_020 Hb_166232_010 Hb_166232_010 Hb_005464_040--Hb_166232_010 Hb_005464_040--Hb_000446_100 Hb_000563_080--Hb_001301_020 Hb_000563_080--Hb_003188_020 Hb_000563_080--Hb_166232_010 Hb_000563_080--Hb_004254_070 Hb_000563_080--Hb_000446_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 24.0957 4.356 4.67231 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.16048 484.493 0.0893845

CAGE analysis