Hb_000027_260

Information

Type -
Description -
Location Contig27: 370595-385684
Sequence    

Annotation

kegg
ID cic:CICLE_v10015402mg
description hypothetical protein
nr
ID XP_012082124.1
description PREDICTED: chaperone protein dnaJ 15 [Jatropha curcas]
swissprot
ID Q9ZSY2
description Chaperone protein dnaJ 15 OS=Arabidopsis thaliana GN=ATJ15 PE=1 SV=1
trembl
ID A0A067JZY5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18363 PE=4 SV=1
Gene Ontology
ID GO:0008092
description chaperone protein dnaj 15

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_28147: 370193-385627 , PASA_asmbl_28148: 370163-370662 , PASA_asmbl_28149: 372707-372932
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000027_260 0.0 - - PREDICTED: chaperone protein dnaJ 15 [Jatropha curcas]
2 Hb_000096_140 0.0790776504 transcription factor TF Family: GNAT PREDICTED: probable amino-acid acetyltransferase NAGS1, chloroplastic isoform X1 [Jatropha curcas]
3 Hb_000454_090 0.0812071119 - - PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit-like [Tarenaya hassleriana]
4 Hb_032202_040 0.0864978928 - - PREDICTED: phospholipase D beta 2 [Jatropha curcas]
5 Hb_007533_040 0.0901052601 - - protein phosphatase 2c, putative [Ricinus communis]
6 Hb_005601_040 0.0940733018 - - Histone deacetylase 1 isoform 1 [Theobroma cacao]
7 Hb_004108_160 0.1005345568 - - PREDICTED: myosin heavy chain, non-muscle-like [Jatropha curcas]
8 Hb_003305_040 0.101459275 - - AP47/50p mRNA family protein [Populus trichocarpa]
9 Hb_000393_020 0.1015613286 - - lipid binding protein, putative [Ricinus communis]
10 Hb_001541_120 0.1018942745 - - hypothetical protein JCGZ_17842 [Jatropha curcas]
11 Hb_008566_030 0.1046472391 - - hypothetical protein POPTR_0013s02780g [Populus trichocarpa]
12 Hb_006740_030 0.1051084765 - - PREDICTED: calcium uniporter protein 6, mitochondrial-like [Jatropha curcas]
13 Hb_001404_110 0.105151728 - - phosphoinositide 5-phosphatase, putative [Ricinus communis]
14 Hb_043792_040 0.105626645 - - hypothetical protein, partial [Rosa rugosa]
15 Hb_001629_030 0.1057649799 - - PAP-specific phosphatase HAL2-like family protein [Populus trichocarpa]
16 Hb_010344_050 0.1060378571 - - Adagio 1 -like protein [Gossypium arboreum]
17 Hb_001818_100 0.1062551435 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 11-like [Jatropha curcas]
18 Hb_001352_020 0.1078937566 - - PREDICTED: ATP-dependent zinc metalloprotease FTSH 8, mitochondrial-like [Jatropha curcas]
19 Hb_000008_440 0.1082655955 - - PREDICTED: probable E3 ubiquitin-protein ligase LOG2 [Jatropha curcas]
20 Hb_001912_110 0.1094333798 - - PREDICTED: protoheme IX farnesyltransferase, mitochondrial isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000027_260 Hb_000027_260 Hb_000096_140 Hb_000096_140 Hb_000027_260--Hb_000096_140 Hb_000454_090 Hb_000454_090 Hb_000027_260--Hb_000454_090 Hb_032202_040 Hb_032202_040 Hb_000027_260--Hb_032202_040 Hb_007533_040 Hb_007533_040 Hb_000027_260--Hb_007533_040 Hb_005601_040 Hb_005601_040 Hb_000027_260--Hb_005601_040 Hb_004108_160 Hb_004108_160 Hb_000027_260--Hb_004108_160 Hb_001912_110 Hb_001912_110 Hb_000096_140--Hb_001912_110 Hb_000096_140--Hb_004108_160 Hb_001352_020 Hb_001352_020 Hb_000096_140--Hb_001352_020 Hb_010515_020 Hb_010515_020 Hb_000096_140--Hb_010515_020 Hb_002830_010 Hb_002830_010 Hb_000096_140--Hb_002830_010 Hb_000173_410 Hb_000173_410 Hb_000454_090--Hb_000173_410 Hb_000252_100 Hb_000252_100 Hb_000454_090--Hb_000252_100 Hb_004078_040 Hb_004078_040 Hb_000454_090--Hb_004078_040 Hb_000220_100 Hb_000220_100 Hb_000454_090--Hb_000220_100 Hb_000393_020 Hb_000393_020 Hb_000454_090--Hb_000393_020 Hb_005765_050 Hb_005765_050 Hb_000454_090--Hb_005765_050 Hb_000008_440 Hb_000008_440 Hb_032202_040--Hb_000008_440 Hb_001226_140 Hb_001226_140 Hb_032202_040--Hb_001226_140 Hb_001818_100 Hb_001818_100 Hb_032202_040--Hb_001818_100 Hb_032202_040--Hb_007533_040 Hb_000482_040 Hb_000482_040 Hb_032202_040--Hb_000482_040 Hb_004583_010 Hb_004583_010 Hb_007533_040--Hb_004583_010 Hb_000140_090 Hb_000140_090 Hb_007533_040--Hb_000140_090 Hb_003913_130 Hb_003913_130 Hb_007533_040--Hb_003913_130 Hb_001357_200 Hb_001357_200 Hb_007533_040--Hb_001357_200 Hb_006740_030 Hb_006740_030 Hb_007533_040--Hb_006740_030 Hb_007533_040--Hb_005601_040 Hb_001629_030 Hb_001629_030 Hb_005601_040--Hb_001629_030 Hb_001195_400 Hb_001195_400 Hb_005601_040--Hb_001195_400 Hb_005601_040--Hb_001818_100 Hb_005976_080 Hb_005976_080 Hb_005601_040--Hb_005976_080 Hb_000185_220 Hb_000185_220 Hb_005601_040--Hb_000185_220 Hb_003305_040 Hb_003305_040 Hb_005601_040--Hb_003305_040 Hb_003153_010 Hb_003153_010 Hb_004108_160--Hb_003153_010 Hb_000556_090 Hb_000556_090 Hb_004108_160--Hb_000556_090 Hb_004108_160--Hb_001629_030 Hb_008959_010 Hb_008959_010 Hb_004108_160--Hb_008959_010 Hb_004108_160--Hb_001818_100 Hb_008421_020 Hb_008421_020 Hb_004108_160--Hb_008421_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.25094 11.3898 16.0274 23.6393 11.4033 9.87094
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.5923 15.0301 32.3887 12.9924 23.846

CAGE analysis