Hb_000028_010

Information

Type -
Description -
Location Contig28: 35195-36721
Sequence    

Annotation

kegg
ID rcu:RCOM_1064670
description cytochrome P450, putative (EC:1.14.14.1)
nr
ID XP_002521476.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID Q9FVS9
description Alkane hydroxylase MAH1 OS=Arabidopsis thaliana GN=CYP96A15 PE=2 SV=1
trembl
ID B9S657
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_1064670 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 86b1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_29163: 35187-35348
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000028_010 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_018663_010 0.0798477323 transcription factor TF Family: C2C2-YABBY PREDICTED: axial regulator YABBY 5 [Jatropha curcas]
3 Hb_010737_030 0.086292348 - - unnamed protein product [Vitis vinifera]
4 Hb_000051_130 0.0872384011 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
5 Hb_000496_100 0.0878087305 - - PREDICTED: cytochrome P450 94A2-like [Jatropha curcas]
6 Hb_102900_010 0.0930793617 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X2 [Jatropha curcas]
7 Hb_008165_010 0.0975445165 - - PREDICTED: 36.4 kDa proline-rich protein [Solanum lycopersicum]
8 Hb_000436_110 0.100139479 - - PREDICTED: uncharacterized protein LOC105141197 [Populus euphratica]
9 Hb_000375_200 0.1106270899 - - cyanohydrin UDP-glucosyltransferase UGT85K5 [Manihot esculenta]
10 Hb_000751_010 0.1110946365 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000243_180 0.1117106879 - - PREDICTED: aldehyde dehydrogenase family 3 member F1 [Jatropha curcas]
12 Hb_102129_040 0.1124475403 - - PREDICTED: PTI1-like tyrosine-protein kinase 2 isoform X1 [Jatropha curcas]
13 Hb_000120_260 0.1129468314 - - PREDICTED: ABC transporter G family member 11 [Jatropha curcas]
14 Hb_000130_400 0.1157235008 transcription factor TF Family: bZIP hypothetical protein POPTR_0001s38320g [Populus trichocarpa]
15 Hb_028486_020 0.1158949735 - - conserved hypothetical protein [Ricinus communis]
16 Hb_006586_060 0.1187701955 transcription factor TF Family: SBP Squamosa promoter-binding protein, putative [Ricinus communis]
17 Hb_000424_050 0.1218555847 - - erecta, putative [Ricinus communis]
18 Hb_000193_170 0.1226362293 transcription factor TF Family: MYB Myb domain 16-like protein [Theobroma cacao]
19 Hb_000187_020 0.1237550065 - - Xanthine/uracil permease family protein isoform 1 [Theobroma cacao]
20 Hb_059832_010 0.1249775223 - - PREDICTED: glutamate receptor 2.9-like [Jatropha curcas]

Gene co-expression network

sample Hb_000028_010 Hb_000028_010 Hb_018663_010 Hb_018663_010 Hb_000028_010--Hb_018663_010 Hb_010737_030 Hb_010737_030 Hb_000028_010--Hb_010737_030 Hb_000051_130 Hb_000051_130 Hb_000028_010--Hb_000051_130 Hb_000496_100 Hb_000496_100 Hb_000028_010--Hb_000496_100 Hb_102900_010 Hb_102900_010 Hb_000028_010--Hb_102900_010 Hb_008165_010 Hb_008165_010 Hb_000028_010--Hb_008165_010 Hb_018663_010--Hb_010737_030 Hb_018663_010--Hb_008165_010 Hb_000375_200 Hb_000375_200 Hb_018663_010--Hb_000375_200 Hb_000436_110 Hb_000436_110 Hb_018663_010--Hb_000436_110 Hb_018663_010--Hb_000496_100 Hb_018663_010--Hb_102900_010 Hb_010737_030--Hb_000496_100 Hb_010737_030--Hb_102900_010 Hb_010737_030--Hb_000436_110 Hb_010737_030--Hb_008165_010 Hb_010737_030--Hb_000375_200 Hb_000120_260 Hb_000120_260 Hb_000051_130--Hb_000120_260 Hb_000187_020 Hb_000187_020 Hb_000051_130--Hb_000187_020 Hb_000051_130--Hb_010737_030 Hb_000051_130--Hb_000496_100 Hb_000051_130--Hb_018663_010 Hb_059832_010 Hb_059832_010 Hb_000051_130--Hb_059832_010 Hb_028486_020 Hb_028486_020 Hb_000496_100--Hb_028486_020 Hb_000496_100--Hb_102900_010 Hb_000130_400 Hb_000130_400 Hb_000496_100--Hb_000130_400 Hb_000496_100--Hb_008165_010 Hb_000751_010 Hb_000751_010 Hb_102900_010--Hb_000751_010 Hb_102900_010--Hb_008165_010 Hb_102129_040 Hb_102129_040 Hb_102900_010--Hb_102129_040 Hb_102900_010--Hb_000436_110 Hb_008165_010--Hb_000436_110 Hb_002235_260 Hb_002235_260 Hb_008165_010--Hb_002235_260 Hb_004117_060 Hb_004117_060 Hb_008165_010--Hb_004117_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 1.20058 0.277178 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0240701 0 0 0.201573

CAGE analysis