Hb_000028_330

Information

Type -
Description -
Location Contig28: 301673-302647
Sequence    

Annotation

kegg
ID pxb:103950550
description mitogen-activated protein kinase kinase 9-like
nr
ID XP_009360049.1
description PREDICTED: mitogen-activated protein kinase kinase 9-like [Pyrus x bretschneideri]
swissprot
ID Q9FX43
description Mitogen-activated protein kinase kinase 9 OS=Arabidopsis thaliana GN=MKK9 PE=1 SV=1
trembl
ID A0A067KLM3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14745 PE=4 SV=1
Gene Ontology
ID GO:0004674
description mitogen-activated protein kinase kinase 9-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000028_330 0.0 - - PREDICTED: mitogen-activated protein kinase kinase 9-like [Pyrus x bretschneideri]
2 Hb_001198_160 0.065482991 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
3 Hb_001610_070 0.0727092616 - - hypothetical protein MIMGU_mgv1a022867mg [Erythranthe guttata]
4 Hb_006736_040 0.0769298323 - - PREDICTED: glucan endo-1,3-beta-glucosidase, basic isoform-like [Populus euphratica]
5 Hb_001518_030 0.0775728719 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
6 Hb_029622_090 0.082772954 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 2-like [Jatropha curcas]
7 Hb_026048_030 0.084648359 - - conserved hypothetical protein [Ricinus communis]
8 Hb_024650_010 0.0870775825 - - PREDICTED: BAHD acyltransferase DCR [Jatropha curcas]
9 Hb_001663_090 0.0889187975 - - ribonuclease t2, putative [Ricinus communis]
10 Hb_004324_100 0.090430069 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
11 Hb_003435_040 0.0921928518 - - tonoplast intrinsic protein [Hevea brasiliensis]
12 Hb_002739_160 0.095609555 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
13 Hb_000836_220 0.0985105505 - - UDP-glucosyltransferase, putative [Ricinus communis]
14 Hb_008352_020 0.1023985267 - - hypothetical protein [Cecembia lonarensis]
15 Hb_030827_080 0.1094415402 - - PREDICTED: uncharacterized protein LOC105648491 [Jatropha curcas]
16 Hb_011915_020 0.1102573839 - - PREDICTED: arogenate dehydratase/prephenate dehydratase 6, chloroplastic-like [Jatropha curcas]
17 Hb_001310_080 0.1121437869 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein AZF2-like [Jatropha curcas]
18 Hb_021576_160 0.1212464301 transcription factor TF Family: WRKY putative WRKY transcription factor family protein [Populus trichocarpa]
19 Hb_002676_110 0.1226296988 - - PREDICTED: xyloglucan endotransglucosylase/hydrolase 2-like [Gossypium raimondii]
20 Hb_004109_110 0.124239775 - - dioxygenase family protein [Populus trichocarpa]

Gene co-expression network

sample Hb_000028_330 Hb_000028_330 Hb_001198_160 Hb_001198_160 Hb_000028_330--Hb_001198_160 Hb_001610_070 Hb_001610_070 Hb_000028_330--Hb_001610_070 Hb_006736_040 Hb_006736_040 Hb_000028_330--Hb_006736_040 Hb_001518_030 Hb_001518_030 Hb_000028_330--Hb_001518_030 Hb_029622_090 Hb_029622_090 Hb_000028_330--Hb_029622_090 Hb_026048_030 Hb_026048_030 Hb_000028_330--Hb_026048_030 Hb_001198_160--Hb_001610_070 Hb_000836_220 Hb_000836_220 Hb_001198_160--Hb_000836_220 Hb_177215_020 Hb_177215_020 Hb_001198_160--Hb_177215_020 Hb_138086_010 Hb_138086_010 Hb_001198_160--Hb_138086_010 Hb_000054_140 Hb_000054_140 Hb_001198_160--Hb_000054_140 Hb_011915_020 Hb_011915_020 Hb_001610_070--Hb_011915_020 Hb_001610_070--Hb_006736_040 Hb_024650_010 Hb_024650_010 Hb_001610_070--Hb_024650_010 Hb_001610_070--Hb_000836_220 Hb_006736_040--Hb_024650_010 Hb_003435_040 Hb_003435_040 Hb_006736_040--Hb_003435_040 Hb_001013_080 Hb_001013_080 Hb_006736_040--Hb_001013_080 Hb_006736_040--Hb_001518_030 Hb_001518_030--Hb_026048_030 Hb_001518_030--Hb_024650_010 Hb_001518_030--Hb_003435_040 Hb_001310_080 Hb_001310_080 Hb_001518_030--Hb_001310_080 Hb_001663_090 Hb_001663_090 Hb_029622_090--Hb_001663_090 Hb_002048_070 Hb_002048_070 Hb_029622_090--Hb_002048_070 Hb_029622_090--Hb_011915_020 Hb_021576_160 Hb_021576_160 Hb_029622_090--Hb_021576_160 Hb_004324_100 Hb_004324_100 Hb_029622_090--Hb_004324_100 Hb_026048_030--Hb_001310_080 Hb_113396_010 Hb_113396_010 Hb_026048_030--Hb_113396_010 Hb_026048_030--Hb_024650_010 Hb_000365_190 Hb_000365_190 Hb_026048_030--Hb_000365_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 17.3497 11.3204 18.2025 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.43333 3.44398

CAGE analysis