Hb_000028_430

Information

Type -
Description -
Location Contig28: 389384-393468
Sequence    

Annotation

kegg
ID rcu:RCOM_0287510
description hypothetical protein
nr
ID XP_012081283.1
description PREDICTED: uncharacterized protein LOC105641369 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K1L7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18399 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_29220: 391326-393449
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000028_430 0.0 - - PREDICTED: uncharacterized protein LOC105641369 isoform X1 [Jatropha curcas]
2 Hb_005054_020 0.107564694 - - PREDICTED: probable sugar phosphate/phosphate translocator At3g11320 [Jatropha curcas]
3 Hb_001250_080 0.1124045008 - - PREDICTED: F-box/kelch-repeat protein At1g23390 [Jatropha curcas]
4 Hb_000227_280 0.1166189914 - - PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440 [Jatropha curcas]
5 Hb_000928_120 0.1191010646 - - PREDICTED: benzyl alcohol O-benzoyltransferase-like [Jatropha curcas]
6 Hb_003001_130 0.1207852672 - - conserved hypothetical protein [Ricinus communis]
7 Hb_003849_190 0.1268778816 - - PREDICTED: uncharacterized protein LOC105644700 [Jatropha curcas]
8 Hb_009862_020 0.1281303581 - - PREDICTED: uncharacterized protein LOC105650670 [Jatropha curcas]
9 Hb_002325_060 0.1286404202 - - PREDICTED: ADP-ribosylation factor-like protein 8B-like [Glycine max]
10 Hb_004943_040 0.1351423125 - - PREDICTED: BTB/POZ domain-containing protein At1g30440 isoform X1 [Jatropha curcas]
11 Hb_000077_160 0.1356668964 - - Phospho-N-acetylmuramoyl-pentapeptide-transferase, putative [Theobroma cacao]
12 Hb_000800_010 0.1362196478 - - PREDICTED: glycosyltransferase family protein 64 protein C5 [Jatropha curcas]
13 Hb_132840_160 0.1446116652 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000923_100 0.1457335676 - - chloride channel clc, putative [Ricinus communis]
15 Hb_023344_110 0.1465903587 - - PREDICTED: xyloglucan galactosyltransferase KATAMARI1 [Jatropha curcas]
16 Hb_001474_020 0.1468883788 - - PREDICTED: uncharacterized protein LOC105650917 [Jatropha curcas]
17 Hb_012762_040 0.1478941145 - - big map kinase/bmk, putative [Ricinus communis]
18 Hb_000753_120 0.1480246627 - - PREDICTED: uncharacterized protein At1g04910-like [Jatropha curcas]
19 Hb_000283_140 0.1489429633 - - PREDICTED: transcriptional corepressor LEUNIG-like isoform X1 [Jatropha curcas]
20 Hb_002391_320 0.1500396256 - - PREDICTED: phospholipase D delta-like [Jatropha curcas]

Gene co-expression network

sample Hb_000028_430 Hb_000028_430 Hb_005054_020 Hb_005054_020 Hb_000028_430--Hb_005054_020 Hb_001250_080 Hb_001250_080 Hb_000028_430--Hb_001250_080 Hb_000227_280 Hb_000227_280 Hb_000028_430--Hb_000227_280 Hb_000928_120 Hb_000928_120 Hb_000028_430--Hb_000928_120 Hb_003001_130 Hb_003001_130 Hb_000028_430--Hb_003001_130 Hb_003849_190 Hb_003849_190 Hb_000028_430--Hb_003849_190 Hb_005054_020--Hb_000928_120 Hb_002325_060 Hb_002325_060 Hb_005054_020--Hb_002325_060 Hb_005054_020--Hb_003849_190 Hb_000365_280 Hb_000365_280 Hb_005054_020--Hb_000365_280 Hb_000056_080 Hb_000056_080 Hb_005054_020--Hb_000056_080 Hb_004943_040 Hb_004943_040 Hb_001250_080--Hb_004943_040 Hb_002391_320 Hb_002391_320 Hb_001250_080--Hb_002391_320 Hb_000570_020 Hb_000570_020 Hb_001250_080--Hb_000570_020 Hb_001250_080--Hb_000928_120 Hb_000800_010 Hb_000800_010 Hb_001250_080--Hb_000800_010 Hb_005488_130 Hb_005488_130 Hb_000227_280--Hb_005488_130 Hb_007894_070 Hb_007894_070 Hb_000227_280--Hb_007894_070 Hb_000227_280--Hb_003001_130 Hb_000283_140 Hb_000283_140 Hb_000227_280--Hb_000283_140 Hb_004241_110 Hb_004241_110 Hb_000227_280--Hb_004241_110 Hb_004522_030 Hb_004522_030 Hb_000928_120--Hb_004522_030 Hb_000928_120--Hb_000283_140 Hb_000928_120--Hb_003001_130 Hb_000622_330 Hb_000622_330 Hb_000928_120--Hb_000622_330 Hb_000928_120--Hb_000570_020 Hb_007537_030 Hb_007537_030 Hb_000928_120--Hb_007537_030 Hb_000603_020 Hb_000603_020 Hb_003001_130--Hb_000603_020 Hb_003001_130--Hb_000283_140 Hb_003001_130--Hb_004241_110 Hb_000271_220 Hb_000271_220 Hb_003001_130--Hb_000271_220 Hb_008248_020 Hb_008248_020 Hb_003849_190--Hb_008248_020 Hb_023344_110 Hb_023344_110 Hb_003849_190--Hb_023344_110 Hb_000735_140 Hb_000735_140 Hb_003849_190--Hb_000735_140 Hb_002875_070 Hb_002875_070 Hb_003849_190--Hb_002875_070 Hb_002450_030 Hb_002450_030 Hb_003849_190--Hb_002450_030 Hb_003849_190--Hb_000056_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.85452 60.6432 45.3493 97.2241 3.42234 5.86615
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.1061 19.898 11.4513 16.6658 58.3279

CAGE analysis