Hb_000029_200

Information

Type -
Description -
Location Contig29: 199011-206969
Sequence    

Annotation

kegg
ID tcc:TCM_041323
description Peptidyl-prolyl cis-trans isomerase G
nr
ID XP_012084579.1
description PREDICTED: uncharacterized protein LOC105643943 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K547
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20209 PE=4 SV=1
Gene Ontology
ID GO:0016853
description peptidyl-prolyl cis-trans isomerase g

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_30363: 199352-206808 , PASA_asmbl_30364: 199401-206993
cDNA
(Sanger)
(ID:Location)		 051_C23.ab1: 199354-206808

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000029_200 0.0 - - PREDICTED: uncharacterized protein LOC105643943 [Jatropha curcas]
2 Hb_002864_050 0.0510357613 - - PREDICTED: ras-related protein RABH1b [Jatropha curcas]
3 Hb_000510_110 0.0662767833 - - PREDICTED: signal recognition particle 9 kDa protein [Jatropha curcas]
4 Hb_003893_050 0.0683965157 - - PREDICTED: SUMO-activating enzyme subunit 1B-1 isoform X1 [Jatropha curcas]
5 Hb_001314_100 0.0730919813 - - hypothetical protein POPTR_0001s01820g [Populus trichocarpa]
6 Hb_012573_070 0.0734616033 - - conserved hypothetical protein [Ricinus communis]
7 Hb_007416_030 0.0736929022 - - PREDICTED: transcription initiation factor TFIID subunit 10 [Jatropha curcas]
8 Hb_000283_110 0.0738975597 - - PREDICTED: probable prefoldin subunit 4 isoform X2 [Jatropha curcas]
9 Hb_003683_110 0.0757499221 - - JHL10I11.3 [Jatropha curcas]
10 Hb_005511_160 0.0763019019 - - OB-fold nucleic acid binding domain-containing protein [Theobroma cacao]
11 Hb_002830_020 0.0779051459 - - PREDICTED: outer envelope pore protein 16-3, chloroplastic/mitochondrial [Jatropha curcas]
12 Hb_005063_050 0.0806577582 - - PREDICTED: probable prefoldin subunit 4 isoform X1 [Jatropha curcas]
13 Hb_003203_040 0.080730839 - - PREDICTED: transcription initiation factor TFIID subunit 7 [Vitis vinifera]
14 Hb_000574_160 0.0818512969 - - PREDICTED: arogenate dehydrogenase 2, chloroplastic [Jatropha curcas]
15 Hb_165132_010 0.081927815 - - PREDICTED: uncharacterized protein LOC105134496 [Populus euphratica]
16 Hb_004931_090 0.0820899232 - - PREDICTED: chromatin modification-related protein MEAF6-like isoform X2 [Jatropha curcas]
17 Hb_010672_060 0.0822674312 - - gaba(A) receptor-associated protein, putative [Ricinus communis]
18 Hb_001341_090 0.0830884012 - - PREDICTED: adenylate kinase isoenzyme 6 homolog [Jatropha curcas]
19 Hb_001300_040 0.0836691899 - - PREDICTED: uncharacterized protein LOC105642466 [Jatropha curcas]
20 Hb_001842_040 0.084186385 - - PREDICTED: uncharacterized protein LOC100800807 isoform X2 [Glycine max]

Gene co-expression network

sample Hb_000029_200 Hb_000029_200 Hb_002864_050 Hb_002864_050 Hb_000029_200--Hb_002864_050 Hb_000510_110 Hb_000510_110 Hb_000029_200--Hb_000510_110 Hb_003893_050 Hb_003893_050 Hb_000029_200--Hb_003893_050 Hb_001314_100 Hb_001314_100 Hb_000029_200--Hb_001314_100 Hb_012573_070 Hb_012573_070 Hb_000029_200--Hb_012573_070 Hb_007416_030 Hb_007416_030 Hb_000029_200--Hb_007416_030 Hb_002830_020 Hb_002830_020 Hb_002864_050--Hb_002830_020 Hb_002864_050--Hb_007416_030 Hb_165132_010 Hb_165132_010 Hb_002864_050--Hb_165132_010 Hb_101705_030 Hb_101705_030 Hb_002864_050--Hb_101705_030 Hb_002874_190 Hb_002874_190 Hb_002864_050--Hb_002874_190 Hb_002518_050 Hb_002518_050 Hb_000510_110--Hb_002518_050 Hb_004931_090 Hb_004931_090 Hb_000510_110--Hb_004931_090 Hb_001300_040 Hb_001300_040 Hb_000510_110--Hb_001300_040 Hb_000510_110--Hb_012573_070 Hb_003683_110 Hb_003683_110 Hb_000510_110--Hb_003683_110 Hb_005063_050 Hb_005063_050 Hb_003893_050--Hb_005063_050 Hb_000283_110 Hb_000283_110 Hb_003893_050--Hb_000283_110 Hb_002431_050 Hb_002431_050 Hb_003893_050--Hb_002431_050 Hb_003203_040 Hb_003203_040 Hb_003893_050--Hb_003203_040 Hb_010672_060 Hb_010672_060 Hb_003893_050--Hb_010672_060 Hb_001314_100--Hb_012573_070 Hb_001369_640 Hb_001369_640 Hb_001314_100--Hb_001369_640 Hb_168054_010 Hb_168054_010 Hb_001314_100--Hb_168054_010 Hb_001314_100--Hb_165132_010 Hb_134949_020 Hb_134949_020 Hb_001314_100--Hb_134949_020 Hb_000545_150 Hb_000545_150 Hb_012573_070--Hb_000545_150 Hb_003528_060 Hb_003528_060 Hb_012573_070--Hb_003528_060 Hb_012573_070--Hb_002518_050 Hb_000926_300 Hb_000926_300 Hb_012573_070--Hb_000926_300 Hb_012573_070--Hb_003683_110 Hb_000608_370 Hb_000608_370 Hb_007416_030--Hb_000608_370 Hb_002686_020 Hb_002686_020 Hb_007416_030--Hb_002686_020 Hb_000788_090 Hb_000788_090 Hb_007416_030--Hb_000788_090 Hb_001047_230 Hb_001047_230 Hb_007416_030--Hb_001047_230 Hb_007416_030--Hb_003683_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
28.1362 9.6689 17.0429 18.6523 22.3006 30.5168
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
38.4909 77.8431 35.0631 10.8903 14.5691

CAGE analysis