Hb_000030_010

Information

Type -
Description -
Location Contig30: 14292-17060
Sequence    

Annotation

kegg
ID rcu:RCOM_1121630
description chaperone protein DNAj, putative
nr
ID XP_012070449.1
description PREDICTED: uncharacterized protein LOC105632627 [Jatropha curcas]
swissprot
ID B0JW23
description Chaperone protein DnaJ OS=Microcystis aeruginosa (strain NIES-843) GN=dnaJ PE=3 SV=1
trembl
ID A0A067KU35
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02721 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000030_010 0.0 - - PREDICTED: uncharacterized protein LOC105632627 [Jatropha curcas]
2 Hb_000120_950 0.0469874383 - - PREDICTED: protein GRIP [Jatropha curcas]
3 Hb_005062_070 0.0634967536 - - RNA splicing protein mrs2, mitochondrial, putative [Ricinus communis]
4 Hb_003609_040 0.0641629311 - - PREDICTED: uncharacterized protein LOC105632878 [Jatropha curcas]
5 Hb_007547_010 0.0664890289 - - PREDICTED: diphthamide biosynthesis protein 1 [Jatropha curcas]
6 Hb_001623_420 0.0681969344 - - nucleotide binding protein, putative [Ricinus communis]
7 Hb_000392_300 0.0684164843 - - PREDICTED: RINT1-like protein MAG2 [Jatropha curcas]
8 Hb_002477_160 0.0707717805 - - hypothetical protein L484_013453 [Morus notabilis]
9 Hb_003642_060 0.0708767668 - - hypothetical protein RCOM_1189860 [Ricinus communis]
10 Hb_000421_260 0.071579744 - - PREDICTED: carbamoyl-phosphate synthase large chain, chloroplastic [Jatropha curcas]
11 Hb_001584_330 0.0717028102 - - PREDICTED: shaggy-related protein kinase alpha [Jatropha curcas]
12 Hb_010795_010 0.0725768448 - - protein with unknown function [Ricinus communis]
13 Hb_000000_080 0.0732071938 - - lipoate-protein ligase B, putative [Ricinus communis]
14 Hb_001454_210 0.0745024913 - - PREDICTED: uncharacterized protein LOC105643435 [Jatropha curcas]
15 Hb_001635_100 0.0752118454 - - PREDICTED: dentin sialophosphoprotein isoform X5 [Populus euphratica]
16 Hb_000190_140 0.0759393188 transcription factor TF Family: TRAF PREDICTED: ETO1-like protein 1 [Jatropha curcas]
17 Hb_007951_050 0.0762910877 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
18 Hb_005306_110 0.0778736931 - - casein kinase, putative [Ricinus communis]
19 Hb_000754_060 0.0784151059 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 69 isoform X1 [Jatropha curcas]
20 Hb_001862_190 0.079635655 - - PREDICTED: F-box-like/WD repeat-containing protein TBL1XR1 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000030_010 Hb_000030_010 Hb_000120_950 Hb_000120_950 Hb_000030_010--Hb_000120_950 Hb_005062_070 Hb_005062_070 Hb_000030_010--Hb_005062_070 Hb_003609_040 Hb_003609_040 Hb_000030_010--Hb_003609_040 Hb_007547_010 Hb_007547_010 Hb_000030_010--Hb_007547_010 Hb_001623_420 Hb_001623_420 Hb_000030_010--Hb_001623_420 Hb_000392_300 Hb_000392_300 Hb_000030_010--Hb_000392_300 Hb_000754_060 Hb_000754_060 Hb_000120_950--Hb_000754_060 Hb_000190_140 Hb_000190_140 Hb_000120_950--Hb_000190_140 Hb_000436_070 Hb_000436_070 Hb_000120_950--Hb_000436_070 Hb_000120_950--Hb_001623_420 Hb_002477_160 Hb_002477_160 Hb_000120_950--Hb_002477_160 Hb_001454_210 Hb_001454_210 Hb_005062_070--Hb_001454_210 Hb_001030_120 Hb_001030_120 Hb_005062_070--Hb_001030_120 Hb_004046_010 Hb_004046_010 Hb_005062_070--Hb_004046_010 Hb_005062_070--Hb_000190_140 Hb_009111_050 Hb_009111_050 Hb_005062_070--Hb_009111_050 Hb_000001_020 Hb_000001_020 Hb_003609_040--Hb_000001_020 Hb_003609_040--Hb_007547_010 Hb_000943_070 Hb_000943_070 Hb_003609_040--Hb_000943_070 Hb_000172_370 Hb_000172_370 Hb_003609_040--Hb_000172_370 Hb_003297_030 Hb_003297_030 Hb_003609_040--Hb_003297_030 Hb_002182_040 Hb_002182_040 Hb_007547_010--Hb_002182_040 Hb_014720_160 Hb_014720_160 Hb_007547_010--Hb_014720_160 Hb_007547_010--Hb_000001_020 Hb_007547_010--Hb_003297_030 Hb_001584_330 Hb_001584_330 Hb_001623_420--Hb_001584_330 Hb_000224_170 Hb_000224_170 Hb_001623_420--Hb_000224_170 Hb_005306_110 Hb_005306_110 Hb_001623_420--Hb_005306_110 Hb_002685_140 Hb_002685_140 Hb_001623_420--Hb_002685_140 Hb_010381_070 Hb_010381_070 Hb_001623_420--Hb_010381_070 Hb_006065_020 Hb_006065_020 Hb_000392_300--Hb_006065_020 Hb_006185_050 Hb_006185_050 Hb_000392_300--Hb_006185_050 Hb_048937_040 Hb_048937_040 Hb_000392_300--Hb_048937_040 Hb_000089_220 Hb_000089_220 Hb_000392_300--Hb_000089_220 Hb_002496_030 Hb_002496_030 Hb_000392_300--Hb_002496_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
36.1034 13.1437 9.80256 7.97165 33.3425 30.5609
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
26.4115 24.6495 32.8714 10.6258 10.568

CAGE analysis