Hb_000030_030

Information

Type -
Description -
Location Contig30: 18712-23867
Sequence    

Annotation

kegg
ID rcu:RCOM_1121710
description galactose-1-phosphate uridylyltransferase, putative (EC:2.7.7.12)
nr
ID XP_012070458.1
description PREDICTED: ADP-glucose phosphorylase [Jatropha curcas]
swissprot
ID Q9FK51
description ADP-glucose phosphorylase OS=Arabidopsis thaliana GN=At5g18200 PE=1 SV=1
trembl
ID A0A067KUD1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02727 PE=4 SV=1
Gene Ontology
ID GO:0005634
description probable galactose-1-phosphate uridyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_31477: 21050-23699 , PASA_asmbl_31478: 21856-22121 , PASA_asmbl_31480: 23756-24101
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000030_030 0.0 - - PREDICTED: ADP-glucose phosphorylase [Jatropha curcas]
2 Hb_005846_040 0.0535962136 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Populus euphratica]
3 Hb_001703_060 0.0540144487 - - protein kinase, putative [Ricinus communis]
4 Hb_003502_060 0.0552533616 - - PREDICTED: alpha-1,3/1,6-mannosyltransferase ALG2 [Jatropha curcas]
5 Hb_002232_410 0.0559907668 - - PREDICTED: L-galactose dehydrogenase [Jatropha curcas]
6 Hb_003151_040 0.0625255357 transcription factor TF Family: Alfin-like zinc finger family protein [Populus trichocarpa]
7 Hb_168978_010 0.0648715026 - - PREDICTED: uncharacterized protein LOC105630751 [Jatropha curcas]
8 Hb_002301_150 0.0674536426 - - Drought-responsive family protein [Theobroma cacao]
9 Hb_008725_230 0.068468333 - - PREDICTED: CTP synthase [Jatropha curcas]
10 Hb_008013_050 0.0686034006 transcription factor TF Family: PHD PREDICTED: PHD finger protein At1g33420 [Jatropha curcas]
11 Hb_006059_050 0.0712140998 - - PREDICTED: polyadenylate-binding protein 1 [Jatropha curcas]
12 Hb_000460_030 0.0733607368 - - 4-hydroxybenzoate octaprenyltransferase, putative [Ricinus communis]
13 Hb_000703_350 0.0735349818 - - PREDICTED: WD repeat-containing protein 26-like [Jatropha curcas]
14 Hb_000331_550 0.0744106113 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 67 [Jatropha curcas]
15 Hb_000373_070 0.0749409485 - - PREDICTED: serine/threonine-protein kinase HT1-like isoform X2 [Jatropha curcas]
16 Hb_000732_010 0.075138572 - - PREDICTED: nitric oxide synthase-interacting protein [Pyrus x bretschneideri]
17 Hb_006615_240 0.0755441553 - - PREDICTED: uncharacterized protein LOC105640673 [Jatropha curcas]
18 Hb_000431_170 0.0757153967 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein 511 [Jatropha curcas]
19 Hb_003761_010 0.0769812459 - - alcohol dehydrogenase, putative [Ricinus communis]
20 Hb_003918_010 0.0769895947 - - PREDICTED: biotin--protein ligase 2-like [Jatropha curcas]

Gene co-expression network

sample Hb_000030_030 Hb_000030_030 Hb_005846_040 Hb_005846_040 Hb_000030_030--Hb_005846_040 Hb_001703_060 Hb_001703_060 Hb_000030_030--Hb_001703_060 Hb_003502_060 Hb_003502_060 Hb_000030_030--Hb_003502_060 Hb_002232_410 Hb_002232_410 Hb_000030_030--Hb_002232_410 Hb_003151_040 Hb_003151_040 Hb_000030_030--Hb_003151_040 Hb_168978_010 Hb_168978_010 Hb_000030_030--Hb_168978_010 Hb_005846_040--Hb_003151_040 Hb_000373_070 Hb_000373_070 Hb_005846_040--Hb_000373_070 Hb_001245_100 Hb_001245_100 Hb_005846_040--Hb_001245_100 Hb_003787_010 Hb_003787_010 Hb_005846_040--Hb_003787_010 Hb_004116_190 Hb_004116_190 Hb_005846_040--Hb_004116_190 Hb_000331_200 Hb_000331_200 Hb_001703_060--Hb_000331_200 Hb_000510_300 Hb_000510_300 Hb_001703_060--Hb_000510_300 Hb_001427_160 Hb_001427_160 Hb_001703_060--Hb_001427_160 Hb_001225_080 Hb_001225_080 Hb_001703_060--Hb_001225_080 Hb_000081_160 Hb_000081_160 Hb_001703_060--Hb_000081_160 Hb_008013_050 Hb_008013_050 Hb_003502_060--Hb_008013_050 Hb_002301_150 Hb_002301_150 Hb_003502_060--Hb_002301_150 Hb_089032_030 Hb_089032_030 Hb_003502_060--Hb_089032_030 Hb_003502_060--Hb_003151_040 Hb_015778_010 Hb_015778_010 Hb_003502_060--Hb_015778_010 Hb_008725_230 Hb_008725_230 Hb_002232_410--Hb_008725_230 Hb_002205_110 Hb_002205_110 Hb_002232_410--Hb_002205_110 Hb_000732_010 Hb_000732_010 Hb_002232_410--Hb_000732_010 Hb_005271_220 Hb_005271_220 Hb_002232_410--Hb_005271_220 Hb_000028_370 Hb_000028_370 Hb_002232_410--Hb_000028_370 Hb_001766_060 Hb_001766_060 Hb_003151_040--Hb_001766_060 Hb_003151_040--Hb_000373_070 Hb_006059_050 Hb_006059_050 Hb_003151_040--Hb_006059_050 Hb_000152_500 Hb_000152_500 Hb_003151_040--Hb_000152_500 Hb_000001_060 Hb_000001_060 Hb_003151_040--Hb_000001_060 Hb_001511_060 Hb_001511_060 Hb_168978_010--Hb_001511_060 Hb_000359_060 Hb_000359_060 Hb_168978_010--Hb_000359_060 Hb_000260_350 Hb_000260_350 Hb_168978_010--Hb_000260_350 Hb_093458_040 Hb_093458_040 Hb_168978_010--Hb_093458_040 Hb_149985_010 Hb_149985_010 Hb_168978_010--Hb_149985_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.74459 8.66718 7.94451 11.8925 7.37502 8.23123
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.2561 13.992 11.8614 9.53288 6.66765

CAGE analysis