Hb_000031_150

Information

Type -
Description -
Location Contig31: 111088-113133
Sequence    

Annotation

kegg
ID rcu:RCOM_0919160
description protein binding protein, putative
nr
ID XP_012076350.1
description PREDICTED: exocyst complex component EXO70A1 [Jatropha curcas]
swissprot
ID Q9LZD3
description Exocyst complex component EXO70A1 OS=Arabidopsis thaliana GN=EXO70A1 PE=1 SV=1
trembl
ID A0A067KB50
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07027 PE=4 SV=1
Gene Ontology
ID GO:0000145
description exocyst complex component exo70a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_32781: 110483-111865
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000031_150 0.0 - - PREDICTED: exocyst complex component EXO70A1 [Jatropha curcas]
2 Hb_002811_060 0.1076025413 - - PREDICTED: protein transport protein Sec24-like At4g32640 [Jatropha curcas]
3 Hb_000933_060 0.1106943467 - - conserved hypothetical protein [Ricinus communis]
4 Hb_001047_030 0.1156898062 - - PREDICTED: protein transport protein SEC13 homolog B [Jatropha curcas]
5 Hb_004306_080 0.1165504465 - - PREDICTED: B-cell receptor-associated protein 31 [Jatropha curcas]
6 Hb_003050_390 0.1175258695 - - PREDICTED: uncharacterized protein LOC104442543 [Eucalyptus grandis]
7 Hb_001691_120 0.1192112001 desease resistance Gene Name: AAA PREDICTED: vesicle-fusing ATPase [Jatropha curcas]
8 Hb_028639_010 0.1201914971 - - transporter, putative [Ricinus communis]
9 Hb_005170_040 0.1206247999 - - PREDICTED: probable protein S-acyltransferase 7 [Jatropha curcas]
10 Hb_000318_510 0.1216223773 - - PREDICTED: pentatricopeptide repeat-containing protein At2g15980 [Jatropha curcas]
11 Hb_017987_020 0.1220913094 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000608_320 0.1252396923 - - PREDICTED: uncharacterized protein LOC105644891 [Jatropha curcas]
13 Hb_002299_060 0.1271308623 transcription factor TF Family: FAR1 PREDICTED: probable receptor-like protein kinase At2g39360 [Jatropha curcas]
14 Hb_003988_010 0.1275694451 - - PREDICTED: vacuolar-sorting receptor 3 [Jatropha curcas]
15 Hb_012022_090 0.1292453228 - - PREDICTED: LIMR family protein At5g01460 [Gossypium raimondii]
16 Hb_181810_020 0.1294117576 - - -
17 Hb_002196_020 0.1300876105 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
18 Hb_004102_140 0.1302927531 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000207_390 0.1312912925 - - PREDICTED: uncharacterized protein LOC105637143 [Jatropha curcas]
20 Hb_001143_160 0.1316080489 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 26 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000031_150 Hb_000031_150 Hb_002811_060 Hb_002811_060 Hb_000031_150--Hb_002811_060 Hb_000933_060 Hb_000933_060 Hb_000031_150--Hb_000933_060 Hb_001047_030 Hb_001047_030 Hb_000031_150--Hb_001047_030 Hb_004306_080 Hb_004306_080 Hb_000031_150--Hb_004306_080 Hb_003050_390 Hb_003050_390 Hb_000031_150--Hb_003050_390 Hb_001691_120 Hb_001691_120 Hb_000031_150--Hb_001691_120 Hb_012022_090 Hb_012022_090 Hb_002811_060--Hb_012022_090 Hb_005054_100 Hb_005054_100 Hb_002811_060--Hb_005054_100 Hb_000116_500 Hb_000116_500 Hb_002811_060--Hb_000116_500 Hb_003988_010 Hb_003988_010 Hb_002811_060--Hb_003988_010 Hb_000608_320 Hb_000608_320 Hb_002811_060--Hb_000608_320 Hb_006660_010 Hb_006660_010 Hb_002811_060--Hb_006660_010 Hb_050454_010 Hb_050454_010 Hb_000933_060--Hb_050454_010 Hb_044736_010 Hb_044736_010 Hb_000933_060--Hb_044736_010 Hb_003994_280 Hb_003994_280 Hb_000933_060--Hb_003994_280 Hb_001640_030 Hb_001640_030 Hb_000933_060--Hb_001640_030 Hb_001018_130 Hb_001018_130 Hb_000933_060--Hb_001018_130 Hb_002400_470 Hb_002400_470 Hb_001047_030--Hb_002400_470 Hb_008864_110 Hb_008864_110 Hb_001047_030--Hb_008864_110 Hb_001301_200 Hb_001301_200 Hb_001047_030--Hb_001301_200 Hb_007904_200 Hb_007904_200 Hb_001047_030--Hb_007904_200 Hb_048937_040 Hb_048937_040 Hb_001047_030--Hb_048937_040 Hb_010457_030 Hb_010457_030 Hb_001047_030--Hb_010457_030 Hb_004228_010 Hb_004228_010 Hb_004306_080--Hb_004228_010 Hb_000785_040 Hb_000785_040 Hb_004306_080--Hb_000785_040 Hb_004306_080--Hb_000116_500 Hb_004102_140 Hb_004102_140 Hb_004306_080--Hb_004102_140 Hb_007062_020 Hb_007062_020 Hb_004306_080--Hb_007062_020 Hb_002493_020 Hb_002493_020 Hb_004306_080--Hb_002493_020 Hb_000270_510 Hb_000270_510 Hb_003050_390--Hb_000270_510 Hb_000080_150 Hb_000080_150 Hb_003050_390--Hb_000080_150 Hb_000270_520 Hb_000270_520 Hb_003050_390--Hb_000270_520 Hb_001135_130 Hb_001135_130 Hb_003050_390--Hb_001135_130 Hb_003528_010 Hb_003528_010 Hb_003050_390--Hb_003528_010 Hb_004204_170 Hb_004204_170 Hb_003050_390--Hb_004204_170 Hb_001691_120--Hb_005054_100 Hb_005679_050 Hb_005679_050 Hb_001691_120--Hb_005679_050 Hb_000169_090 Hb_000169_090 Hb_001691_120--Hb_000169_090 Hb_001691_120--Hb_002811_060 Hb_009535_020 Hb_009535_020 Hb_001691_120--Hb_009535_020 Hb_028639_010 Hb_028639_010 Hb_001691_120--Hb_028639_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.27604 5.16123 1.96469 7.98995 8.07449 11.1323
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.77819 3.29771 10.0978 4.79311 2.62414

CAGE analysis