Hb_000031_300

Information

Type -
Description -
Location Contig31: 256702-259239
Sequence    

Annotation

kegg
ID rcu:RCOM_0919650
description sensor histidine kinase, putative (EC:2.7.13.3)
nr
ID XP_012076368.1
description PREDICTED: histidine kinase 5 [Jatropha curcas]
swissprot
ID Q3S4A7
description Histidine kinase 5 OS=Arabidopsis thaliana GN=AHK5 PE=1 SV=1
trembl
ID A0A067KMF3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07041 PE=4 SV=1
Gene Ontology
ID GO:0016020
description histidine kinase 5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000031_300 0.0 - - PREDICTED: histidine kinase 5 [Jatropha curcas]
2 Hb_000236_480 0.1724895883 - - PREDICTED: cytochrome P450 CYP72A219-like [Jatropha curcas]
3 Hb_001828_110 0.1798727923 - - PREDICTED: lysine histidine transporter 1-like [Tarenaya hassleriana]
4 Hb_001953_140 0.1806375883 - - Taxadien-5-alpha-ol O-acetyltransferase, putative [Ricinus communis]
5 Hb_002965_060 0.1844532867 - - Protein COBRA precursor, putative [Ricinus communis]
6 Hb_000152_170 0.1888405745 - - PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Jatropha curcas]
7 Hb_000465_350 0.1924108859 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 2 [Jatropha curcas]
8 Hb_004116_150 0.194629296 - - conserved hypothetical protein [Ricinus communis]
9 Hb_003573_050 0.1996759493 - - ARF GTPase activator, putative [Ricinus communis]
10 Hb_000161_180 0.2010411786 - - Protein argonaute 2 [Morus notabilis]
11 Hb_001307_020 0.2016203241 - - electron carrier, putative [Ricinus communis]
12 Hb_008806_040 0.2018697516 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Jatropha curcas]
13 Hb_000914_140 0.2034064182 transcription factor TF Family: Trihelix transcription factor, putative [Ricinus communis]
14 Hb_004046_060 0.2083702627 - - PREDICTED: protein CDI [Jatropha curcas]
15 Hb_004970_070 0.2085534497 - - hypothetical protein POPTR_0002s12620g [Populus trichocarpa]
16 Hb_008406_070 0.2091796831 - - PREDICTED: probable protein phosphatase 2C 58 [Jatropha curcas]
17 Hb_002026_050 0.2092925233 - - PREDICTED: BTB/POZ domain-containing protein At5g41330 [Jatropha curcas]
18 Hb_003747_250 0.2096182478 - - PREDICTED: potassium transporter 7 isoform X2 [Elaeis guineensis]
19 Hb_004899_110 0.2098690082 - - PREDICTED: uncharacterized protein LOC105638015 [Jatropha curcas]
20 Hb_002048_070 0.2108042923 - - hypothetical protein JCGZ_15146 [Jatropha curcas]

Gene co-expression network

sample Hb_000031_300 Hb_000031_300 Hb_000236_480 Hb_000236_480 Hb_000031_300--Hb_000236_480 Hb_001828_110 Hb_001828_110 Hb_000031_300--Hb_001828_110 Hb_001953_140 Hb_001953_140 Hb_000031_300--Hb_001953_140 Hb_002965_060 Hb_002965_060 Hb_000031_300--Hb_002965_060 Hb_000152_170 Hb_000152_170 Hb_000031_300--Hb_000152_170 Hb_000465_350 Hb_000465_350 Hb_000031_300--Hb_000465_350 Hb_006289_020 Hb_006289_020 Hb_000236_480--Hb_006289_020 Hb_004452_090 Hb_004452_090 Hb_000236_480--Hb_004452_090 Hb_001541_190 Hb_001541_190 Hb_000236_480--Hb_001541_190 Hb_006060_010 Hb_006060_010 Hb_000236_480--Hb_006060_010 Hb_000020_080 Hb_000020_080 Hb_000236_480--Hb_000020_080 Hb_003573_050 Hb_003573_050 Hb_001828_110--Hb_003573_050 Hb_003747_250 Hb_003747_250 Hb_001828_110--Hb_003747_250 Hb_000914_140 Hb_000914_140 Hb_001828_110--Hb_000914_140 Hb_000527_050 Hb_000527_050 Hb_001828_110--Hb_000527_050 Hb_001307_020 Hb_001307_020 Hb_001828_110--Hb_001307_020 Hb_000300_190 Hb_000300_190 Hb_001828_110--Hb_000300_190 Hb_004116_150 Hb_004116_150 Hb_001953_140--Hb_004116_150 Hb_031108_010 Hb_031108_010 Hb_001953_140--Hb_031108_010 Hb_001329_080 Hb_001329_080 Hb_001953_140--Hb_001329_080 Hb_000717_040 Hb_000717_040 Hb_001953_140--Hb_000717_040 Hb_001433_160 Hb_001433_160 Hb_001953_140--Hb_001433_160 Hb_002965_060--Hb_000300_190 Hb_003055_080 Hb_003055_080 Hb_002965_060--Hb_003055_080 Hb_003992_280 Hb_003992_280 Hb_002965_060--Hb_003992_280 Hb_006120_130 Hb_006120_130 Hb_002965_060--Hb_006120_130 Hb_000375_260 Hb_000375_260 Hb_002965_060--Hb_000375_260 Hb_003728_110 Hb_003728_110 Hb_002965_060--Hb_003728_110 Hb_138086_010 Hb_138086_010 Hb_000152_170--Hb_138086_010 Hb_000365_180 Hb_000365_180 Hb_000152_170--Hb_000365_180 Hb_000563_630 Hb_000563_630 Hb_000152_170--Hb_000563_630 Hb_000163_180 Hb_000163_180 Hb_000152_170--Hb_000163_180 Hb_028841_010 Hb_028841_010 Hb_000152_170--Hb_028841_010 Hb_008406_070 Hb_008406_070 Hb_000152_170--Hb_008406_070 Hb_002048_070 Hb_002048_070 Hb_000465_350--Hb_002048_070 Hb_023386_060 Hb_023386_060 Hb_000465_350--Hb_023386_060 Hb_001141_210 Hb_001141_210 Hb_000465_350--Hb_001141_210 Hb_002676_110 Hb_002676_110 Hb_000465_350--Hb_002676_110 Hb_000060_080 Hb_000060_080 Hb_000465_350--Hb_000060_080 Hb_003968_010 Hb_003968_010 Hb_000465_350--Hb_003968_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.173847 0.35759 0.343828 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0427433 0.0403279 0.0766574 0.0449233

CAGE analysis