Hb_000032_130

Information

Type -
Description -
Location Contig32: 113264-114958
Sequence    

Annotation

kegg
ID rcu:RCOM_0708470
description Pectinesterase PPE8B precursor, putative (EC:3.1.1.11)
nr
ID XP_012087193.1
description PREDICTED: probable pectinesterase/pectinesterase inhibitor 12 [Jatropha curcas]
swissprot
ID O48711
description Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1
trembl
ID A0A067JR89
description Pectinesterase OS=Jatropha curcas GN=JCGZ_20474 PE=3 SV=1
Gene Ontology
ID GO:0005618
description probable pectinesterase pectinesterase inhibitor 12

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000032_130 0.0 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 12 [Jatropha curcas]
2 Hb_097104_010 0.0077700085 - - Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
3 Hb_006277_090 0.0330942089 - - PREDICTED: uncharacterized protein LOC105649700 [Jatropha curcas]
4 Hb_000103_170 0.0404356745 - - uncharacterized protein LOC100501254 [Zea mays]
5 Hb_099509_010 0.0585938837 - - PREDICTED: vacuolar iron transporter 1-like isoform X2 [Jatropha curcas]
6 Hb_005253_050 0.0848890254 - - Isoflavone reductase, putative [Ricinus communis]
7 Hb_171810_020 0.1007387829 - - peptide/glutathione transporter OPT1 [Vitis vinifera]
8 Hb_017358_060 0.1102778212 - - PREDICTED: uncharacterized protein LOC105641510 [Jatropha curcas]
9 Hb_009083_060 0.1162673376 - - PREDICTED: uncharacterized protein LOC103344557 [Prunus mume]
10 Hb_000037_210 0.1171119255 - - -
11 Hb_003428_020 0.1197001158 - - PREDICTED: uncharacterized protein LOC105140247 [Populus euphratica]
12 Hb_003729_050 0.1211325646 - - PREDICTED: vacuolar iron transporter 1-like isoform X1 [Jatropha curcas]
13 Hb_002701_100 0.1239762244 transcription factor TF Family: MIKC PREDICTED: truncated transcription factor CAULIFLOWER A-like [Jatropha curcas]
14 Hb_007676_090 0.1240575769 - - PREDICTED: uncharacterized protein LOC105644038 [Jatropha curcas]
15 Hb_006355_100 0.1398315703 - - hypothetical protein glysoja_002455 [Glycine soja]
16 Hb_132840_060 0.1423095765 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH57-like [Jatropha curcas]
17 Hb_008032_010 0.1428992897 - - Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
18 Hb_036377_010 0.148067809 - - PREDICTED: uncharacterized protein LOC105649946 [Jatropha curcas]
19 Hb_155874_020 0.1497430382 - - Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
20 Hb_000186_020 0.1539290109 - - PREDICTED: uncharacterized protein LOC104901327 [Beta vulgaris subsp. vulgaris]

Gene co-expression network

sample Hb_000032_130 Hb_000032_130 Hb_097104_010 Hb_097104_010 Hb_000032_130--Hb_097104_010 Hb_006277_090 Hb_006277_090 Hb_000032_130--Hb_006277_090 Hb_000103_170 Hb_000103_170 Hb_000032_130--Hb_000103_170 Hb_099509_010 Hb_099509_010 Hb_000032_130--Hb_099509_010 Hb_005253_050 Hb_005253_050 Hb_000032_130--Hb_005253_050 Hb_171810_020 Hb_171810_020 Hb_000032_130--Hb_171810_020 Hb_097104_010--Hb_006277_090 Hb_097104_010--Hb_000103_170 Hb_097104_010--Hb_099509_010 Hb_097104_010--Hb_005253_050 Hb_097104_010--Hb_171810_020 Hb_006277_090--Hb_000103_170 Hb_006277_090--Hb_099509_010 Hb_009083_060 Hb_009083_060 Hb_006277_090--Hb_009083_060 Hb_000037_210 Hb_000037_210 Hb_006277_090--Hb_000037_210 Hb_000103_170--Hb_099509_010 Hb_000103_170--Hb_009083_060 Hb_000103_170--Hb_000037_210 Hb_099509_010--Hb_009083_060 Hb_099509_010--Hb_000037_210 Hb_003428_020 Hb_003428_020 Hb_099509_010--Hb_003428_020 Hb_005253_050--Hb_171810_020 Hb_036377_010 Hb_036377_010 Hb_005253_050--Hb_036377_010 Hb_017358_060 Hb_017358_060 Hb_005253_050--Hb_017358_060 Hb_005253_050--Hb_006277_090 Hb_171810_020--Hb_036377_010 Hb_004090_010 Hb_004090_010 Hb_171810_020--Hb_004090_010 Hb_171810_020--Hb_017358_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.211219 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.0470195

CAGE analysis