Hb_000032_220

Information

Type -
Description -
Location Contig32: 190874-193041
Sequence    

Annotation

kegg
ID rcu:RCOM_1691820
description hypothetical protein
nr
ID XP_012086734.1
description PREDICTED: abscisic acid receptor PYL8-like isoform X1 [Jatropha curcas]
swissprot
ID Q9FGM1
description Abscisic acid receptor PYL8 OS=Arabidopsis thaliana GN=PYL8 PE=1 SV=1
trembl
ID A0A067JR79
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20464 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33706: 190472-193209
cDNA
(Sanger)
(ID:Location)		 010_K10.ab1: 190883-193209 , 050_A07.ab1: 190928-193209 , 050_L05.ab1: 191012-193201

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000032_220 0.0 - - PREDICTED: abscisic acid receptor PYL8-like isoform X1 [Jatropha curcas]
2 Hb_001396_220 0.0720795024 - - nuclear transport factor, putative [Ricinus communis]
3 Hb_015934_020 0.0804588938 - - PREDICTED: uncharacterized protein LOC105638669 [Jatropha curcas]
4 Hb_002387_060 0.0857128152 - - conserved hypothetical protein [Ricinus communis]
5 Hb_002078_460 0.0888263596 - - -
6 Hb_183963_020 0.0985282606 - - PREDICTED: uncharacterized protein LOC105644615 [Jatropha curcas]
7 Hb_002352_010 0.0986983996 - - PREDICTED: rop guanine nucleotide exchange factor 1 [Jatropha curcas]
8 Hb_007021_020 0.0996279544 transcription factor TF Family: B3 PREDICTED: B3 domain-containing transcription factor VRN1 isoform X1 [Jatropha curcas]
9 Hb_000085_300 0.1003599668 - - -
10 Hb_005000_290 0.1005038745 transcription factor TF Family: HSF hypothetical protein JCGZ_07430 [Jatropha curcas]
11 Hb_012522_030 0.1008027863 - - ankyrin repeat-containing protein, putative [Ricinus communis]
12 Hb_002028_130 0.1010631544 - - PREDICTED: MHC class II regulatory factor RFX1-like [Jatropha curcas]
13 Hb_001473_130 0.1032429169 - - PREDICTED: ubiquinone biosynthesis monooxygenase COQ6 [Jatropha curcas]
14 Hb_001278_050 0.1041397778 - - PREDICTED: uncharacterized protein LOC105636924 [Jatropha curcas]
15 Hb_025087_010 0.104477369 - - PREDICTED: RING-H2 finger protein ATL56 [Jatropha curcas]
16 Hb_000051_040 0.1063954068 - - PREDICTED: uncharacterized protein LOC102597788 [Solanum tuberosum]
17 Hb_005618_040 0.1085226255 - - -
18 Hb_007810_030 0.1090154215 - - PREDICTED: uncharacterized protein LOC105647693 [Jatropha curcas]
19 Hb_000261_460 0.1098112862 - - 60S ribosomal protein L13aA [Hevea brasiliensis]
20 Hb_001935_030 0.1102766387 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000032_220 Hb_000032_220 Hb_001396_220 Hb_001396_220 Hb_000032_220--Hb_001396_220 Hb_015934_020 Hb_015934_020 Hb_000032_220--Hb_015934_020 Hb_002387_060 Hb_002387_060 Hb_000032_220--Hb_002387_060 Hb_002078_460 Hb_002078_460 Hb_000032_220--Hb_002078_460 Hb_183963_020 Hb_183963_020 Hb_000032_220--Hb_183963_020 Hb_002352_010 Hb_002352_010 Hb_000032_220--Hb_002352_010 Hb_001473_130 Hb_001473_130 Hb_001396_220--Hb_001473_130 Hb_001396_220--Hb_015934_020 Hb_001396_220--Hb_002352_010 Hb_005000_290 Hb_005000_290 Hb_001396_220--Hb_005000_290 Hb_000329_600 Hb_000329_600 Hb_001396_220--Hb_000329_600 Hb_007810_030 Hb_007810_030 Hb_015934_020--Hb_007810_030 Hb_015934_020--Hb_005000_290 Hb_015934_020--Hb_002387_060 Hb_000078_010 Hb_000078_010 Hb_015934_020--Hb_000078_010 Hb_002685_090 Hb_002685_090 Hb_015934_020--Hb_002685_090 Hb_012522_030 Hb_012522_030 Hb_002387_060--Hb_012522_030 Hb_000085_300 Hb_000085_300 Hb_002387_060--Hb_000085_300 Hb_002387_060--Hb_183963_020 Hb_002291_030 Hb_002291_030 Hb_002387_060--Hb_002291_030 Hb_001616_060 Hb_001616_060 Hb_002078_460--Hb_001616_060 Hb_002028_130 Hb_002028_130 Hb_002078_460--Hb_002028_130 Hb_001278_050 Hb_001278_050 Hb_002078_460--Hb_001278_050 Hb_007382_150 Hb_007382_150 Hb_002078_460--Hb_007382_150 Hb_000865_070 Hb_000865_070 Hb_002078_460--Hb_000865_070 Hb_025087_010 Hb_025087_010 Hb_183963_020--Hb_025087_010 Hb_183963_020--Hb_000085_300 Hb_001722_040 Hb_001722_040 Hb_183963_020--Hb_001722_040 Hb_001366_230 Hb_001366_230 Hb_183963_020--Hb_001366_230 Hb_007021_020 Hb_007021_020 Hb_183963_020--Hb_007021_020 Hb_002352_010--Hb_001473_130 Hb_002527_070 Hb_002527_070 Hb_002352_010--Hb_002527_070 Hb_000427_110 Hb_000427_110 Hb_002352_010--Hb_000427_110 Hb_001677_110 Hb_001677_110 Hb_002352_010--Hb_001677_110 Hb_002326_030 Hb_002326_030 Hb_002352_010--Hb_002326_030 Hb_002352_010--Hb_012522_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
428.034 55.856 27.3011 72.992 352.503 628.586
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1134.48 918.8 1023.81 218.575 46.9817

CAGE analysis