Hb_000032_260

Information

Type -
Description -
Location Contig32: 227772-229715
Sequence    

Annotation

kegg
ID pop:POPTR_0001s10570g
description POPTRDRAFT_180022; hypothetical protein
nr
ID XP_012086728.1
description PREDICTED: probable protein phosphatase 2C 51 [Jatropha curcas]
swissprot
ID Q5SN75
description Probable protein phosphatase 2C 8 OS=Oryza sativa subsp. japonica GN=Os01g0656200 PE=2 SV=1
trembl
ID A0A067JR75
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20459 PE=4 SV=1
Gene Ontology
ID GO:0004722
description probable protein phosphatase 2c 51

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000032_260 0.0 - - PREDICTED: probable protein phosphatase 2C 51 [Jatropha curcas]
2 Hb_005867_040 0.0974889308 transcription factor TF Family: RWP-RK PREDICTED: protein RKD4 [Jatropha curcas]
3 Hb_000143_050 0.0984274261 - - PREDICTED: MFP1 attachment factor 1-like [Jatropha curcas]
4 Hb_001621_180 0.0990288785 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-1 [Jatropha curcas]
5 Hb_000061_160 0.1068970273 - - PREDICTED: NEP1-interacting protein-like 2 isoform X1 [Jatropha curcas]
6 Hb_005276_100 0.1100957261 - - PREDICTED: uncharacterized protein LOC105640215 [Jatropha curcas]
7 Hb_183963_020 0.1107990236 - - PREDICTED: uncharacterized protein LOC105644615 [Jatropha curcas]
8 Hb_000563_590 0.1144210462 - - PREDICTED: 60S ribosomal protein L22-2-like [Jatropha curcas]
9 Hb_029223_030 0.1147912515 - - hypothetical protein POPTR_0006s12500g [Populus trichocarpa]
10 Hb_005615_070 0.1152299472 - - Rab7 [Hevea brasiliensis]
11 Hb_000085_300 0.1187537149 - - -
12 Hb_005000_290 0.1227570011 transcription factor TF Family: HSF hypothetical protein JCGZ_07430 [Jatropha curcas]
13 Hb_000340_430 0.1294986549 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
14 Hb_000078_030 0.1320649545 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000111_280 0.1323023967 - - diphosphoinositol polyphosphate phosphohydrolase, putative [Ricinus communis]
16 Hb_000193_230 0.1326288113 - - PREDICTED: NEP1-interacting protein-like 2 isoform X1 [Jatropha curcas]
17 Hb_009026_050 0.1331643649 - - vacuolar ATPase F subunit [Hevea brasiliensis]
18 Hb_000599_090 0.1333119733 - - hypothetical protein POPTR_0002s039001g, partial [Populus trichocarpa]
19 Hb_115919_020 0.1337940405 rubber biosynthesis Gene Name: Geranyl geranyl diphosphate synthase geranyl-diphosphate synthase [Hevea brasiliensis]
20 Hb_007747_130 0.1338030612 - - PREDICTED: uncharacterized protein LOC105635879 [Jatropha curcas]

Gene co-expression network

sample Hb_000032_260 Hb_000032_260 Hb_005867_040 Hb_005867_040 Hb_000032_260--Hb_005867_040 Hb_000143_050 Hb_000143_050 Hb_000032_260--Hb_000143_050 Hb_001621_180 Hb_001621_180 Hb_000032_260--Hb_001621_180 Hb_000061_160 Hb_000061_160 Hb_000032_260--Hb_000061_160 Hb_005276_100 Hb_005276_100 Hb_000032_260--Hb_005276_100 Hb_183963_020 Hb_183963_020 Hb_000032_260--Hb_183963_020 Hb_031403_010 Hb_031403_010 Hb_005867_040--Hb_031403_010 Hb_000085_300 Hb_000085_300 Hb_005867_040--Hb_000085_300 Hb_005867_040--Hb_005276_100 Hb_000340_430 Hb_000340_430 Hb_005867_040--Hb_000340_430 Hb_003751_120 Hb_003751_120 Hb_005867_040--Hb_003751_120 Hb_030765_020 Hb_030765_020 Hb_000143_050--Hb_030765_020 Hb_000143_050--Hb_005276_100 Hb_005615_070 Hb_005615_070 Hb_000143_050--Hb_005615_070 Hb_001722_040 Hb_001722_040 Hb_000143_050--Hb_001722_040 Hb_000143_050--Hb_183963_020 Hb_001252_140 Hb_001252_140 Hb_001621_180--Hb_001252_140 Hb_007441_180 Hb_007441_180 Hb_001621_180--Hb_007441_180 Hb_000563_590 Hb_000563_590 Hb_001621_180--Hb_000563_590 Hb_009252_130 Hb_009252_130 Hb_001621_180--Hb_009252_130 Hb_001621_180--Hb_005615_070 Hb_001104_120 Hb_001104_120 Hb_001621_180--Hb_001104_120 Hb_000061_160--Hb_001104_120 Hb_000777_060 Hb_000777_060 Hb_000061_160--Hb_000777_060 Hb_000061_160--Hb_001621_180 Hb_000061_160--Hb_000563_590 Hb_000330_170 Hb_000330_170 Hb_000061_160--Hb_000330_170 Hb_000580_160 Hb_000580_160 Hb_005276_100--Hb_000580_160 Hb_005276_100--Hb_000061_160 Hb_005276_100--Hb_001621_180 Hb_000853_360 Hb_000853_360 Hb_005276_100--Hb_000853_360 Hb_025087_010 Hb_025087_010 Hb_183963_020--Hb_025087_010 Hb_183963_020--Hb_000085_300 Hb_183963_020--Hb_001722_040 Hb_001366_230 Hb_001366_230 Hb_183963_020--Hb_001366_230 Hb_007021_020 Hb_007021_020 Hb_183963_020--Hb_007021_020 Hb_002387_060 Hb_002387_060 Hb_183963_020--Hb_002387_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.809136 0.0419993 0.0373275 0.0128246 0.575342 0.752489
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.04615 1.61758 0.901739 0.170229 0

CAGE analysis