Hb_000032_340

Information

Type -
Description -
Location Contig32: 279543-280058
Sequence    

Annotation

kegg
ID rcu:RCOM_1692070
description hypothetical protein
nr
ID XP_012086718.1
description PREDICTED: uncharacterized protein LOC105645669 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JZ74
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20451 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000032_340 0.0 - - PREDICTED: uncharacterized protein LOC105645669 [Jatropha curcas]
2 Hb_000856_250 0.0835426341 - - short chain alcohol dehydrogenase, putative [Ricinus communis]
3 Hb_000203_150 0.1041519143 - - PREDICTED: uncharacterized protein LOC105116038 [Populus euphratica]
4 Hb_001610_060 0.1216255411 - - hypothetical protein TRIUR3_12067 [Triticum urartu]
5 Hb_000069_520 0.1251211541 - - PREDICTED: transcription factor TRY-like [Jatropha curcas]
6 Hb_010417_090 0.1260744049 - - PREDICTED: protein LURP-one-related 17 [Jatropha curcas]
7 Hb_183209_020 0.1263069006 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 isoform X2 [Jatropha curcas]
8 Hb_002236_010 0.1289255621 - - PREDICTED: bidirectional sugar transporter SWEET4 [Jatropha curcas]
9 Hb_000070_070 0.1318804515 - - PREDICTED: protein LURP-one-related 17 [Jatropha curcas]
10 Hb_016120_020 0.1346497057 - - PREDICTED: tetrahydrocannabinolic acid synthase-like [Jatropha curcas]
11 Hb_002374_060 0.142499887 - - amino acid transporter, putative [Ricinus communis]
12 Hb_000720_060 0.142981775 - - PREDICTED: BON1-associated protein 2-like [Jatropha curcas]
13 Hb_000002_230 0.143859958 - - RING/U-box superfamily protein [Theobroma cacao]
14 Hb_000866_320 0.1465560258 - - receptor protein kinase, putative [Ricinus communis]
15 Hb_000571_060 0.1490262043 - - PREDICTED: uncharacterized protein LOC105648112 [Jatropha curcas]
16 Hb_135720_010 0.1503622963 - - hypothetical protein JCGZ_17857 [Jatropha curcas]
17 Hb_000616_100 0.1524645567 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
18 Hb_001013_060 0.1530096342 - - -
19 Hb_012553_030 0.1538827808 - - TRANSPARENT TESTA 12 protein, putative [Ricinus communis]
20 Hb_002811_110 0.1544584088 - - PREDICTED: probable serine/threonine-protein kinase WNK9 [Jatropha curcas]

Gene co-expression network

sample Hb_000032_340 Hb_000032_340 Hb_000856_250 Hb_000856_250 Hb_000032_340--Hb_000856_250 Hb_000203_150 Hb_000203_150 Hb_000032_340--Hb_000203_150 Hb_001610_060 Hb_001610_060 Hb_000032_340--Hb_001610_060 Hb_000069_520 Hb_000069_520 Hb_000032_340--Hb_000069_520 Hb_010417_090 Hb_010417_090 Hb_000032_340--Hb_010417_090 Hb_183209_020 Hb_183209_020 Hb_000032_340--Hb_183209_020 Hb_016120_020 Hb_016120_020 Hb_000856_250--Hb_016120_020 Hb_000070_070 Hb_000070_070 Hb_000856_250--Hb_000070_070 Hb_000856_250--Hb_010417_090 Hb_000856_250--Hb_000203_150 Hb_002236_010 Hb_002236_010 Hb_000856_250--Hb_002236_010 Hb_001013_060 Hb_001013_060 Hb_000203_150--Hb_001013_060 Hb_000203_150--Hb_001610_060 Hb_000002_230 Hb_000002_230 Hb_000203_150--Hb_000002_230 Hb_000720_060 Hb_000720_060 Hb_000203_150--Hb_000720_060 Hb_000203_150--Hb_183209_020 Hb_001610_060--Hb_001013_060 Hb_001610_060--Hb_000720_060 Hb_001610_060--Hb_016120_020 Hb_001610_060--Hb_000856_250 Hb_001006_030 Hb_001006_030 Hb_000069_520--Hb_001006_030 Hb_002028_160 Hb_002028_160 Hb_000069_520--Hb_002028_160 Hb_001799_090 Hb_001799_090 Hb_000069_520--Hb_001799_090 Hb_000676_170 Hb_000676_170 Hb_000069_520--Hb_000676_170 Hb_002289_110 Hb_002289_110 Hb_000069_520--Hb_002289_110 Hb_002374_060 Hb_002374_060 Hb_000069_520--Hb_002374_060 Hb_010417_090--Hb_000070_070 Hb_000115_290 Hb_000115_290 Hb_010417_090--Hb_000115_290 Hb_002970_070 Hb_002970_070 Hb_010417_090--Hb_002970_070 Hb_000994_100 Hb_000994_100 Hb_010417_090--Hb_000994_100 Hb_010417_090--Hb_002236_010 Hb_050898_010 Hb_050898_010 Hb_183209_020--Hb_050898_010 Hb_103541_010 Hb_103541_010 Hb_183209_020--Hb_103541_010 Hb_189034_010 Hb_189034_010 Hb_183209_020--Hb_189034_010 Hb_183209_020--Hb_000002_230 Hb_000137_030 Hb_000137_030 Hb_183209_020--Hb_000137_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.83398 1.28474 9.44514 0 0.048901
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.200358 0 3.82062 0.942812

CAGE analysis