Hb_000032_430

Information

Type -
Description -
Location Contig32: 325129-325746
Sequence    

Annotation

kegg
ID rcu:RCOM_1692280
description hypothetical protein
nr
ID XP_002509975.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RCU1
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1692280 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000032_430 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_001178_090 0.1167486875 - - Monodehydroascorbate reductase family protein [Populus trichocarpa]
3 Hb_160405_010 0.1170952253 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
4 Hb_003647_040 0.1334886252 - - conserved hypothetical protein [Ricinus communis]
5 Hb_002749_040 0.136932566 - - Ribosomal protein L6 family protein [Theobroma cacao]
6 Hb_002539_050 0.1442508222 - - PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Jatropha curcas]
7 Hb_003050_100 0.1476666144 - - PREDICTED: uncharacterized protein LOC105633987 [Jatropha curcas]
8 Hb_006483_060 0.1568024112 - - PREDICTED: protein RALF-like 34 [Jatropha curcas]
9 Hb_139461_010 0.1577077129 desease resistance Gene Name: NB-ARC Cc-nbs-lrr resistance protein, putative [Theobroma cacao]
10 Hb_002592_050 0.1601793035 - - PREDICTED: LON peptidase N-terminal domain and RING finger protein 1-like [Jatropha curcas]
11 Hb_001178_080 0.1655596316 - - PREDICTED: protein kinase PVPK-1 [Jatropha curcas]
12 Hb_155444_010 0.1664277657 - - -
13 Hb_179960_010 0.1675648324 - - PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Jatropha curcas]
14 Hb_002272_200 0.1720893931 - - PREDICTED: GDSL esterase/lipase At1g54790 isoform X1 [Jatropha curcas]
15 Hb_003529_240 0.172505605 transcription factor TF Family: AP2 PREDICTED: ethylene-responsive transcription factor RAP2-7-like isoform X2 [Gossypium raimondii]
16 Hb_012727_010 0.1730213338 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
17 Hb_034280_010 0.1748764365 - - Protein bem46, putative [Ricinus communis]
18 Hb_005016_020 0.1750586146 desease resistance Gene Name: ABC_membrane ABC transporter family protein [Hevea brasiliensis]
19 Hb_032208_050 0.1751161547 - - PREDICTED: glucan endo-1,3-beta-glucosidase 4 isoform X3 [Jatropha curcas]
20 Hb_159582_010 0.1756823457 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]

Gene co-expression network

sample Hb_000032_430 Hb_000032_430 Hb_001178_090 Hb_001178_090 Hb_000032_430--Hb_001178_090 Hb_160405_010 Hb_160405_010 Hb_000032_430--Hb_160405_010 Hb_003647_040 Hb_003647_040 Hb_000032_430--Hb_003647_040 Hb_002749_040 Hb_002749_040 Hb_000032_430--Hb_002749_040 Hb_002539_050 Hb_002539_050 Hb_000032_430--Hb_002539_050 Hb_003050_100 Hb_003050_100 Hb_000032_430--Hb_003050_100 Hb_179960_010 Hb_179960_010 Hb_001178_090--Hb_179960_010 Hb_000203_070 Hb_000203_070 Hb_001178_090--Hb_000203_070 Hb_012395_050 Hb_012395_050 Hb_001178_090--Hb_012395_050 Hb_001178_090--Hb_003050_100 Hb_002592_050 Hb_002592_050 Hb_001178_090--Hb_002592_050 Hb_004449_090 Hb_004449_090 Hb_160405_010--Hb_004449_090 Hb_005016_020 Hb_005016_020 Hb_160405_010--Hb_005016_020 Hb_000000_110 Hb_000000_110 Hb_160405_010--Hb_000000_110 Hb_001357_030 Hb_001357_030 Hb_160405_010--Hb_001357_030 Hb_001178_080 Hb_001178_080 Hb_160405_010--Hb_001178_080 Hb_012727_010 Hb_012727_010 Hb_003647_040--Hb_012727_010 Hb_001491_040 Hb_001491_040 Hb_003647_040--Hb_001491_040 Hb_002119_040 Hb_002119_040 Hb_003647_040--Hb_002119_040 Hb_000866_320 Hb_000866_320 Hb_003647_040--Hb_000866_320 Hb_000189_070 Hb_000189_070 Hb_003647_040--Hb_000189_070 Hb_155444_010 Hb_155444_010 Hb_002749_040--Hb_155444_010 Hb_002749_040--Hb_012395_050 Hb_030685_010 Hb_030685_010 Hb_002749_040--Hb_030685_010 Hb_002272_200 Hb_002272_200 Hb_002749_040--Hb_002272_200 Hb_002518_020 Hb_002518_020 Hb_002749_040--Hb_002518_020 Hb_186247_010 Hb_186247_010 Hb_002539_050--Hb_186247_010 Hb_003929_190 Hb_003929_190 Hb_002539_050--Hb_003929_190 Hb_000363_180 Hb_000363_180 Hb_002539_050--Hb_000363_180 Hb_010315_100 Hb_010315_100 Hb_002539_050--Hb_010315_100 Hb_148346_010 Hb_148346_010 Hb_002539_050--Hb_148346_010 Hb_004631_170 Hb_004631_170 Hb_002539_050--Hb_004631_170 Hb_003050_100--Hb_002592_050 Hb_032208_050 Hb_032208_050 Hb_003050_100--Hb_032208_050 Hb_005839_030 Hb_005839_030 Hb_003050_100--Hb_005839_030 Hb_001564_090 Hb_001564_090 Hb_003050_100--Hb_001564_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.48195 9.05008 8.14611 33.1964 1.26648 3.03732
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.579965 0.303886 0.133439 10.6992 3.84031

CAGE analysis