Hb_000034_100

Information

Type -
Description -
Location Contig34: 206470-207552
Sequence    

Annotation

kegg
ID rcu:RCOM_1039410
description dnajc14 protein, putative
nr
ID XP_002514038.1
description dnajc14 protein, putative [Ricinus communis]
swissprot
ID P48353
description Protein HLJ1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HLJ1 PE=1 SV=1
trembl
ID B9RJW9
description Dnajc14 protein, putative OS=Ricinus communis GN=RCOM_1039410 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000034_100 0.0 - - dnajc14 protein, putative [Ricinus communis]
2 Hb_005276_210 0.0517920078 - - PREDICTED: DNA repair helicase UVH6 isoform X2 [Jatropha curcas]
3 Hb_000487_110 0.0581259699 - - PREDICTED: cyclin-T1-3-like [Jatropha curcas]
4 Hb_005694_110 0.0615790439 - - hypothetical protein PRUPE_ppa008137mg [Prunus persica]
5 Hb_000096_070 0.0641328937 - - PREDICTED: ruvB-like 2 [Jatropha curcas]
6 Hb_054865_100 0.0694464399 - - PREDICTED: probable protein S-acyltransferase 12 isoform X1 [Jatropha curcas]
7 Hb_005245_130 0.0717542951 - - PREDICTED: uncharacterized protein LOC105643730 [Jatropha curcas]
8 Hb_000613_090 0.0722578526 - - PREDICTED: uncharacterized protein LOC105641542 isoform X1 [Jatropha curcas]
9 Hb_000853_420 0.0735195991 - - PREDICTED: phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial [Jatropha curcas]
10 Hb_008406_110 0.073614732 - - PREDICTED: putative E3 ubiquitin-protein ligase RING1a isoform X1 [Jatropha curcas]
11 Hb_005505_050 0.0742516697 - - PREDICTED: uncharacterized protein LOC105639309 isoform X2 [Jatropha curcas]
12 Hb_000038_170 0.0750111784 - - PREDICTED: SCY1-like protein 2 [Jatropha curcas]
13 Hb_000853_170 0.0755120268 - - PREDICTED: programmed cell death protein 2 isoform X3 [Populus euphratica]
14 Hb_001006_140 0.0797491136 transcription factor TF Family: SNF2 PREDICTED: protein CHROMATIN REMODELING 19 isoform X2 [Jatropha curcas]
15 Hb_000051_070 0.081647463 - - PREDICTED: uncharacterized protein LOC105650959 [Jatropha curcas]
16 Hb_000300_060 0.081986235 - - PREDICTED: F-box protein SKIP24 [Jatropha curcas]
17 Hb_002603_120 0.0819921805 - - PREDICTED: nuclear pore complex protein NUP88 [Jatropha curcas]
18 Hb_001595_030 0.0828610743 - - PREDICTED: nuclear inhibitor of protein phosphatase 1 isoform X1 [Jatropha curcas]
19 Hb_002248_080 0.0846771794 - - PREDICTED: probable ubiquitin-conjugating enzyme E2 25 isoform X2 [Jatropha curcas]
20 Hb_002346_020 0.0850069917 - - -

Gene co-expression network

sample Hb_000034_100 Hb_000034_100 Hb_005276_210 Hb_005276_210 Hb_000034_100--Hb_005276_210 Hb_000487_110 Hb_000487_110 Hb_000034_100--Hb_000487_110 Hb_005694_110 Hb_005694_110 Hb_000034_100--Hb_005694_110 Hb_000096_070 Hb_000096_070 Hb_000034_100--Hb_000096_070 Hb_054865_100 Hb_054865_100 Hb_000034_100--Hb_054865_100 Hb_005245_130 Hb_005245_130 Hb_000034_100--Hb_005245_130 Hb_005276_210--Hb_054865_100 Hb_000300_060 Hb_000300_060 Hb_005276_210--Hb_000300_060 Hb_002477_280 Hb_002477_280 Hb_005276_210--Hb_002477_280 Hb_066182_010 Hb_066182_010 Hb_005276_210--Hb_066182_010 Hb_003952_070 Hb_003952_070 Hb_005276_210--Hb_003952_070 Hb_000613_090 Hb_000613_090 Hb_000487_110--Hb_000613_090 Hb_008406_110 Hb_008406_110 Hb_000487_110--Hb_008406_110 Hb_000038_170 Hb_000038_170 Hb_000487_110--Hb_000038_170 Hb_000487_110--Hb_005276_210 Hb_000487_110--Hb_054865_100 Hb_005694_110--Hb_005276_210 Hb_003010_030 Hb_003010_030 Hb_005694_110--Hb_003010_030 Hb_005694_110--Hb_000096_070 Hb_005694_110--Hb_000300_060 Hb_000462_140 Hb_000462_140 Hb_005694_110--Hb_000462_140 Hb_000016_250 Hb_000016_250 Hb_000096_070--Hb_000016_250 Hb_002518_280 Hb_002518_280 Hb_000096_070--Hb_002518_280 Hb_003058_190 Hb_003058_190 Hb_000096_070--Hb_003058_190 Hb_000563_320 Hb_000563_320 Hb_000096_070--Hb_000563_320 Hb_002248_080 Hb_002248_080 Hb_000096_070--Hb_002248_080 Hb_054865_100--Hb_066182_010 Hb_006620_020 Hb_006620_020 Hb_054865_100--Hb_006620_020 Hb_000327_120 Hb_000327_120 Hb_054865_100--Hb_000327_120 Hb_000174_110 Hb_000174_110 Hb_054865_100--Hb_000174_110 Hb_000645_050 Hb_000645_050 Hb_054865_100--Hb_000645_050 Hb_004934_090 Hb_004934_090 Hb_005245_130--Hb_004934_090 Hb_003406_010 Hb_003406_010 Hb_005245_130--Hb_003406_010 Hb_000803_300 Hb_000803_300 Hb_005245_130--Hb_000803_300 Hb_004096_030 Hb_004096_030 Hb_005245_130--Hb_004096_030 Hb_005245_130--Hb_005276_210 Hb_031939_010 Hb_031939_010 Hb_005245_130--Hb_031939_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
15.9806 15.809 10.0986 6.72309 26.0412 18.1928
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
19.1521 18.5683 13.5654 10.2813 8.1735

CAGE analysis