Hb_000036_060

Information

Type -
Description -
Location Contig36: 192413-194745
Sequence    

Annotation

kegg
ID rcu:RCOM_0739230
description amidase, putative (EC:3.5.1.4)
nr
ID XP_012084367.1
description PREDICTED: putative amidase C869.01 [Jatropha curcas]
swissprot
ID Q9URY4
description Putative amidase C869.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC869.01 PE=3 SV=1
trembl
ID A0A067K5N3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19575 PE=4 SV=1
Gene Ontology
ID GO:0016884
description amidase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000036_060 0.0 - - PREDICTED: putative amidase C869.01 [Jatropha curcas]
2 Hb_002970_070 0.128410383 - - multidrug/pheromone exporter protein [Hevea brasiliensis]
3 Hb_055529_010 0.1425965429 transcription factor TF Family: ERF Ethylene-responsive transcription factor 1B, putative [Ricinus communis]
4 Hb_010417_090 0.1437419516 - - PREDICTED: protein LURP-one-related 17 [Jatropha curcas]
5 Hb_000115_290 0.152141178 - - PREDICTED: uncharacterized protein LOC105124123 [Populus euphratica]
6 Hb_000994_100 0.1542489796 - - RALFL33, putative [Ricinus communis]
7 Hb_013691_040 0.1608054103 - - hypothetical protein B456_001G045900 [Gossypium raimondii]
8 Hb_002477_080 0.1609321493 - - hypothetical protein RCOM_0653450 [Ricinus communis]
9 Hb_002042_160 0.1659414938 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
10 Hb_000020_030 0.1787150825 - - protein binding protein, putative [Ricinus communis]
11 Hb_001823_070 0.1787900466 - - PREDICTED: uncharacterized protein LOC105637371 [Jatropha curcas]
12 Hb_001086_020 0.1820172465 - - hypothetical protein POPTR_0013s01730g [Populus trichocarpa]
13 Hb_000899_060 0.1841606498 - - PREDICTED: uncharacterized protein LOC105793631 [Gossypium raimondii]
14 Hb_116194_010 0.1888632323 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
15 Hb_135720_010 0.1895029474 - - hypothetical protein JCGZ_17857 [Jatropha curcas]
16 Hb_126466_010 0.1921673502 - - alcohol dehydrogenase, putative [Ricinus communis]
17 Hb_008001_020 0.192531453 transcription factor TF Family: GRAS PREDICTED: protein SHORT-ROOT-like [Populus euphratica]
18 Hb_006364_020 0.1931937897 - - PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 [Jatropha curcas]
19 Hb_001401_070 0.1932273753 - - glycogenin, putative [Ricinus communis]
20 Hb_029866_080 0.1948174178 - - PREDICTED: probable inactive receptor kinase At4g23740 [Jatropha curcas]

Gene co-expression network

sample Hb_000036_060 Hb_000036_060 Hb_002970_070 Hb_002970_070 Hb_000036_060--Hb_002970_070 Hb_055529_010 Hb_055529_010 Hb_000036_060--Hb_055529_010 Hb_010417_090 Hb_010417_090 Hb_000036_060--Hb_010417_090 Hb_000115_290 Hb_000115_290 Hb_000036_060--Hb_000115_290 Hb_000994_100 Hb_000994_100 Hb_000036_060--Hb_000994_100 Hb_013691_040 Hb_013691_040 Hb_000036_060--Hb_013691_040 Hb_002970_070--Hb_000994_100 Hb_002042_160 Hb_002042_160 Hb_002970_070--Hb_002042_160 Hb_002970_070--Hb_055529_010 Hb_002970_070--Hb_010417_090 Hb_130967_010 Hb_130967_010 Hb_002970_070--Hb_130967_010 Hb_000020_030 Hb_000020_030 Hb_002970_070--Hb_000020_030 Hb_055529_010--Hb_000994_100 Hb_055529_010--Hb_002042_160 Hb_172633_020 Hb_172633_020 Hb_055529_010--Hb_172633_020 Hb_002490_090 Hb_002490_090 Hb_055529_010--Hb_002490_090 Hb_000172_740 Hb_000172_740 Hb_055529_010--Hb_000172_740 Hb_000070_070 Hb_000070_070 Hb_010417_090--Hb_000070_070 Hb_010417_090--Hb_000115_290 Hb_010417_090--Hb_000994_100 Hb_000856_250 Hb_000856_250 Hb_010417_090--Hb_000856_250 Hb_002236_010 Hb_002236_010 Hb_010417_090--Hb_002236_010 Hb_032260_130 Hb_032260_130 Hb_000115_290--Hb_032260_130 Hb_116194_010 Hb_116194_010 Hb_000115_290--Hb_116194_010 Hb_000115_290--Hb_000994_100 Hb_000115_290--Hb_002970_070 Hb_002374_520 Hb_002374_520 Hb_000115_290--Hb_002374_520 Hb_000994_100--Hb_002042_160 Hb_029260_010 Hb_029260_010 Hb_000994_100--Hb_029260_010 Hb_000347_420 Hb_000347_420 Hb_000994_100--Hb_000347_420 Hb_001086_020 Hb_001086_020 Hb_013691_040--Hb_001086_020 Hb_000504_050 Hb_000504_050 Hb_013691_040--Hb_000504_050 Hb_000316_080 Hb_000316_080 Hb_013691_040--Hb_000316_080 Hb_000987_080 Hb_000987_080 Hb_013691_040--Hb_000987_080 Hb_050898_010 Hb_050898_010 Hb_013691_040--Hb_050898_010 Hb_000922_290 Hb_000922_290 Hb_013691_040--Hb_000922_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0301209 1.01195 0.0224382 1.59579 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0343389 0 0 1.0256 0.394178

CAGE analysis